Halioxenophilus aromaticivorans: R50071_47650
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Entry
R50071_47650 CDS
T10756
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
haro Halioxenophilus aromaticivorans
Pathway
haro03420
Nucleotide excision repair
haro03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
haro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
R50071_47650 (uvrD)
03430 Mismatch repair
R50071_47650 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
haro03400
]
R50071_47650 (uvrD)
Enzymes [BR:
haro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
R50071_47650 (uvrD)
DNA repair and recombination proteins [BR:
haro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
R50071_47650 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
R50071_47650 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
InPase
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BFM09561
LinkDB
All DBs
Position
complement(5621270..5623450)
Genome browser
AA seq
726 aa
AA seq
DB search
MDVSILLDKLNPAQREAVSAPAGHQLILAGAGSGKTRVLVHRIAWLIQVEGVSPYSIMAV
TFTNKAAREMRGRIEELMGVNPRGMWVGTFHGLAHRLLQAHWRDAGLVQNFQILDSDDQL
RLVKRVYNELNIDEKRWPARSAVSYINGHKDEGRRAKHVVESADLYERTMLAVYREYESA
CNRASLVDFGELLLRAHELWLNHPELLKHYQDRFPFILVDEFQDTNTIQYAWLRVLAGQQ
CWLTAVGDDDQSIYGWRGAKIENIQQFDQDFPGTQVVRLEQNYRSTGTILRAANGVISQN
FGRLGKTLRTDGEDGEKISLYAGFNEQDEARFIVDQIESWTAAGNRRDSIAILYRSNAQS
RVLEEALLRESVPYRIYGGQRFYDRLEIKNVLAYLRLMVNREDDAALERIINTPTRGIGG
KTIDDIRLFAREQGCSLWAAGGQMLANKALSNRAGNALLAFRELIDGLSQYLEEPLGELA
ERVIHSSGLYEFHGKEKGEKGQARKENLDELVSACGLFSAEDPEQDPLNEFLAQAALDAG
DEQADEFEDAVQLMTLHSAKGLEFPLVFVAGVEENLFPHKMSVEDPTRLEEERRLAYVGI
TRAMVKLVLTYAETRRIHGKESFNTVSRFVKEIPADCLQEVRIKSSVSRPASFNERPAYG
SRRQPRLSDDPSASGFALGQRVVHPMFGEGVILHCEGSGPNSRIQINFDDVGNKWLVMQY
AKLQPA
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctatattactcgataagctcaaccctgctcagcgcgaggccgtaagcgcc
cccgccgggcatcaattgattctggccggtgctggctcgggcaaaacccgcgtgctggtg
caccgcattgcctggctgatccaggtggagggggtgtcgccctactccattatggcggtg
acctttaccaacaaggccgcccgggaaatgcgtggccgcatcgaagaactcatgggggtg
aacccgcgcggcatgtgggtgggcaccttccacgggttggcccaccgcttactgcaagcc
cactggcgcgatgccggcctggtgcagaactttcaaattctcgacagcgacgaccaattg
cggctggtaaagcgggtgtacaacgagcttaatatcgacgaaaagcgctggccagcgcgt
tcggcggtgagttacatcaacggccacaaagacgaaggccgccgggccaagcacgtggta
gaaagcgccgacttgtacgagcgcaccatgctggcggtgtaccgcgaatacgaaagcgcc
tgcaaccgggccagcctagtggattttggcgagcttttattgcgcgcccacgaactgtgg
ctcaaccacccggagctgcttaagcactaccaggatcgcttcccctttattttggtggac
gaattccaagacaccaacaccattcaatacgcctggctgcgagtgctggccgggcagcag
tgctggttaacggcggtgggcgatgacgaccagtccatctacggctggcgtggcgccaaa
atcgaaaatatccagcagttcgaccaggatttccccggaacccaggtggtgcgcttggag
caaaactaccgatccaccggcactattttgcgcgctgccaacggtgtcatcagccaaaac
tttggccggctgggtaaaaccctgcgcaccgacggcgaagacggtgaaaaaatcagcctc
tacgccggttttaacgagcaggacgaagcccgctttatcgtcgaccaaattgaaagctgg
acggccgccggtaaccgtcgcgacagtattgcgatcttataccgctccaacgcccaatct
cgggtgttggaagaagcactattgcgcgaatccgtgccctaccgcatatacggtggccag
cgcttctacgaccggctagaaattaaaaacgtgttggcctacctgcgattaatggtcaac
cgcgaagacgacgccgccctggagcgcattatcaatacccccacccggggcattggcggc
aaaaccatcgacgatattcggctttttgcccgcgagcagggctgctctctgtgggctgcc
ggtggccaaatgttggccaataaggcactcagtaaccgtgccggcaatgcgctgttggcg
ttccgcgaactcatcgatggcttgtctcagtatttggaagaacctttgggtgagctggcc
gagcgggtgattcacagctccggcctctacgaattccacggcaaagaaaagggcgaaaaa
ggccaggcccgtaaagagaacttggatgaattggtcagcgcctgtggtctgttcagcgcc
gaagacccagagcaggatccgctcaacgaattcttggcccaggccgccctggatgccggc
gacgaacaagccgatgagttcgaagacgccgtacaactaatgaccctgcactcggccaag
ggcttggaatttccactggtgtttgtggccggtgtggaagagaacctgttcccccataag
atgagcgtggaagacccaacccggctagaggaagagcgccgcttggcctacgtgggtatc
acccgggccatggtgaagttggtgcttacttacgccgaaacccgccgcatacatggtaaa
gaaagctttaatactgtatcgcgctttgtaaaagaaatccccgccgactgcctgcaggaa
gtgcgcattaaatccagcgtatcgcgcccggccagctttaacgagcgcccggcctacggc
agccgtcggcaacctcgcctaagtgacgacccatctgccagtggcttcgccctgggccaa
cgggtagtacaccccatgtttggtgaaggcgtaatattgcattgcgaaggcagtgggccc
aacagccgaattcaaatcaacttcgatgacgtgggcaataagtggctggtaatgcagtac
gccaagttgcagccggcctaa
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