Halopseudomonas maritima: HV822_00415
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Entry
HV822_00415 CDS
T08633
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
harr
Halopseudomonas maritima
Pathway
harr02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
harr00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HV822_00415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
harr03021
]
HV822_00415
Transcription machinery [BR:
harr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HV822_00415
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
PhyR_sigma-like
HTH_29
HTH_20
GerE
HTH_24
HTH_11
HTH_Tnp_ISL3
Xre-like-HTH
HTH_40
HTH_17
HTH_31
DUF7317
HTH_10
Motif
Other DBs
NCBI-ProteinID:
UJJ31686
LinkDB
All DBs
Position
88869..89378
Genome browser
AA seq
169 aa
AA seq
DB search
MSETSPTHSVESLYNHHHGWLRTWLRHRLGCPQQAADLAQDTFVRVLMRREPVTGTTPRS
LLSTIARGLLVDHWRRSALERAWLEAVAQLPEAYAPSPEEQQETLQTLEQIARLLDGLRS
PVRQAFMLHQLGGLTHAQVAERMGVSSRTVERHVATALLHCYHLRYGTA
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaacctcacctacccacagtgttgaaagcctctacaaccatcatcacggctgg
ctgcgcacctggttgcgtcaccgcctgggctgtccccagcaggccgccgatctggcgcag
gataccttcgtcagagtgttgatgcggcgtgaaccggtaaccggtactacaccgcgctcg
ctgctgtcgaccattgcccgcggcctgctggttgatcattggcgccgcagcgcactggag
cgcgcctggcttgaggcggtggcacagttgcccgaggcctacgccccttctcctgaagag
cagcaggaaacactgcagacgctcgagcagatcgcccgtctgctggacggtctgcgcagc
ccggtacgccaggcatttatgctgcatcagttaggcggcctgacccatgcgcaggttgcc
gagcgtatgggcgtatccagccgcaccgttgagcgccacgtggctaccgccctgctccac
tgctaccacctgcgctacggaaccgcctga
DBGET
integrated database retrieval system
