Halopseudomonas maritima: HV822_06470
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Entry
HV822_06470 CDS
T08633
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
harr
Halopseudomonas maritima
Pathway
harr03030
DNA replication
harr03430
Mismatch repair
harr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
harr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HV822_06470
03430 Mismatch repair
HV822_06470
03440 Homologous recombination
HV822_06470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
harr03032
]
HV822_06470
03400 DNA repair and recombination proteins [BR:
harr03400
]
HV822_06470
Enzymes [BR:
harr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HV822_06470
DNA replication proteins [BR:
harr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HV822_06470
DNA repair and recombination proteins [BR:
harr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HV822_06470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UJJ32792
LinkDB
All DBs
Position
1430735..1431466
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AA seq
243 aa
AA seq
DB search
MIRFNPAAPDGPAIDWTNELARRAARSRHPALQAFYQAGCATGDTPLESVPLVALDIETT
GLDARRDAIVSIGLVPFDLQRIRCRDAFYEVVKPTTALSEESITFHRITHSDIRQAPPMT
AVLDRVLKAMTGKIMVVHYRAIERAFLDRAVQQHLGESFTFPVIDTMQLEARLHRGSAQP
GWLARLFGRKIESIRLADSRLRYGLPPYSAHHALTDALATAELLQAQTLHHYSPTTALRE
LWS
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgattcgcttcaacccagccgcccccgacggccccgccatcgactggaccaacgagctg
gcgcgccgcgctgcgcgcagccgtcatccggcactgcaagcgttctaccaggccggctgc
gccaccggcgacacgccactggagtccgtgcctctggtcgccctggacatcgaaaccacc
gggctggacgcgcggcgcgacgccattgtcagcattggcctggtgccctttgacctgcaa
cgcatccgttgtcgcgacgcgttttatgaggtggtcaagcccacgacagcactgagcgag
gagtcgattacctttcatcgcattacccactcggatattcgccaggcgccgcccatgacg
gcagtactggaccgtgtgctgaaggccatgaccggcaagatcatggtggtgcactaccgg
gccattgagcgcgcctttctggatcgggcagtgcagcagcatctgggcgaatcgttcacc
tttccggtgatcgacaccatgcagctcgaagcgcgcctgcaccggggcagcgcccagcca
ggctggctggcgcgactgttcggccgcaagatcgaatccatccgcctggccgacagccgc
ctgcgctatggcctgccgccctactccgcacaccacgccctgaccgacgcgctggctacc
gccgagctgctgcaggcgcagaccctgcatcactacagcccgaccaccgccctgcgcgag
ctttggagctaa
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