Halopseudomonas maritima: HV822_07650
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Entry
HV822_07650 CDS
T08633
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
harr
Halopseudomonas maritima
Pathway
harr03030
DNA replication
harr03410
Base excision repair
harr03420
Nucleotide excision repair
harr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
harr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HV822_07650 (polA)
03410 Base excision repair
HV822_07650 (polA)
03420 Nucleotide excision repair
HV822_07650 (polA)
03440 Homologous recombination
HV822_07650 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
harr03032
]
HV822_07650 (polA)
03400 DNA repair and recombination proteins [BR:
harr03400
]
HV822_07650 (polA)
Enzymes [BR:
harr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HV822_07650 (polA)
DNA replication proteins [BR:
harr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HV822_07650 (polA)
DNA repair and recombination proteins [BR:
harr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HV822_07650 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HV822_07650 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
UJJ33010
LinkDB
All DBs
Position
1666906..1669650
Genome browser
AA seq
914 aa
AA seq
DB search
MTDTTPLILVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLLKQYPQSPIAVVF
DAKGPTFRDEMFEQYKSHRPPMPDDLRAQIEPLHAAVRALGLPLLCVDGVEADDVIGTLA
RQSADAGRAVVISTGDKDMAQLVDEHITLVNTMTNTVMDIQGVRDKFGIGPELIIDYLAL
MGDKVDNIPGVPGVGEKTALGLLTGVGGGLDVIYNSLDKVPELPIRGAKKLPEKLEEHKE
MAYLSYQLATIKLDVPLEVQVDALQPSAANREALIELYREMEFKSWLDDLLREAKAEGQA
SDSGDAAEQAQENQYEIITEQADFERWLGKLEAAELFAFDTETTSIDAQRAELVGVSLAV
QPHEAAYIPVAHSYMGVPEQLDRDKVLAALKPYLEDPAKAKVAQHAKYDINVLAHYDIRV
QGVAFDTMLESYVLDATATRHDMDSLSLKYLGQGTIKFEEIAGKGSKQLTFDQIALEQAG
PYAAEDADVTLRLHQTLWAKLQPQPSLARVLQEIEMPLMPVLARIERNGALVDAKLLGQQ
SIELGETMVALERQAFELAGEEFNLGSPKQLGAILYEKQGLPVLSKTAKGQPSTAEAVLA
ELAEQGFELPQVIMQYRSVSKLKSTYTDRLPEQINPRTGRIHTSYHQAVAATGRLSSSDP
NLQNIPIRTSEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLAQDTGLLDAFKHDLDVH
RATAAEVFGVTLDEVTTDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQAQAYIDRYFAR
YPGVLSYMERTREQASEQGYVETLFGRRLYLPEIHAKNQAMRKAAERTAINAPMQGTAAD
IIKRAMIKVESWLNDSSLDARVIMQVHDELVLEVREDQIDAVTQGLKEHMAQAAELDVPL
VVEVGVGDNWDEAH
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgacagacaccacacccctgatcctggtggacggctcgtcctatctttaccgcgccttc
cacgccctgcccccgctgaccaccagcaaaggcctgcccaccggcgccgtcaagggcgtg
ctgaacatgctgaaaagcctgctcaagcagtatccccaaagcccgattgccgtggtattt
gacgccaagggaccgaccttccgcgacgagatgtttgagcagtacaagtcgcaccgcccg
cccatgcctgacgacctgcgcgcccagatcgagccgctgcacgcagccgttcgcgcactc
ggcctgccactactgtgtgtcgacggcgttgaggccgacgacgtgatcggcaccctggcg
cggcagagcgccgacgccggccgtgccgtggtgatctccaccggcgacaaggatatggcg
cagctggtcgacgagcacatcaccctggtcaacaccatgaccaacaccgtgatggacatt
cagggcgtgcgcgacaagtttggtatcgggccggaactgatcatcgactacctggcgctg
atgggcgacaaggtcgataacatcccgggcgtccccggtgtcggtgagaaaaccgcactg
ggcctgctgaccggcgtgggcggcggcctggacgtgatctacaacagcctggacaaggtg
ccggaactaccgattcgcggcgccaagaagctgcccgagaagctcgaagaacacaaggag
atggcctacctgtcctaccagctggccaccatcaagctggatgtaccgctggaggtgcaa
gtcgacgcgctgcaacccagcgccgccaaccgcgaagcactgatcgagctgtaccgcgag
atggagttcaaaagctggctggacgatctgctgcgcgaagccaaggccgaaggccaggcc
agtgacagcggcgatgccgccgaacaagcgcaagaaaaccagtacgagatcatcaccgag
caggccgactttgaacgctggctcggcaagctcgaggccgccgagctgttcgccttcgac
accgaaaccaccagcatcgacgcccagcgcgccgaactggttggcgtgtcgctggcggtg
cagccccacgaggcagcctacattccggttgcccacagctatatgggcgtacccgagcaa
ctcgatcgcgataaggtactcgccgcgctcaagccctatctggaagacccggccaaggcc
aaggtcgcgcagcacgccaagtacgacatcaacgtgctggcccactacgacatccgcgtg
cagggcgtggcctttgacaccatgctcgaatcctacgtgctggacgccaccgccacccgt
cacgacatggacagcctgtcgctcaagtatctgggccaaggcaccatcaagttcgaagag
atcgccggcaagggcagcaagcagctgacctttgatcagattgcactggagcaggccggc
ccctacgccgccgaagacgccgacgtgaccctgcgcctgcaccagaccctgtgggccaag
ctgcagccacagccgtcgctggcgcgtgtgctgcaggagattgaaatgccgctgatgccg
gtgctggcacgcatcgagcgcaacggcgcactggtcgacgccaagctactgggccagcag
agcattgagctgggcgaaacgatggtcgcgctggaacgccaggcattcgagctggcgggc
gaggagttcaacctcggctcacccaagcagctgggcgccatcctgtatgagaagcaaggc
ctgccggtgctgtcgaaaaccgccaagggtcagccctccaccgccgaggcggtgctggcc
gaactggcagagcagggctttgagctgccgcaggtgatcatgcagtaccgcagcgtcagc
aagctcaagagcacctacaccgaccgcctgccggagcagattaacccgcgcaccgggcgt
atccacacctcctaccatcaggccgtggccgccaccgggcgcctgtcgtcctccgaccca
aacctgcagaacatcccgattcgcaccagcgagggccgacgcatccgccaggcctttgtc
gcgcccaagggctacaagctgctggccgccgactactcgcagatcgagctacgcatcatg
gcgcacctggcccaggacaccggcctgctggatgccttcaaacacgacctggacgtacac
cgcgccaccgccgccgaggtgttcggcgttaccctcgacgaggtgaccaccgatcagcgc
cgcagtgccaaggcgatcaacttcggcctgatctacggcatgagcgccttcggtctggcc
aagcagattggcgtcgaccgcaagcaggcccaggcctacatcgaccgctactttgcccgc
tacccgggcgtgctcagctacatggagcgcacccgcgagcaggccagcgagcagggctat
gtcgaaaccctgttcggccgccggctgtacctgccggagattcacgccaagaatcaggcc
atgcgcaaggccgccgagcgcaccgccatcaacgcgccgatgcaaggcaccgccgccgac
atcatcaagcgcgcgatgatcaaggtcgagtcctggctgaacgacagcagcctggatgcc
cgcgtcatcatgcaggtacacgacgaattggttctggaagtacgtgaagaccagatcgat
gccgtcacccagggcctcaaggagcacatggcccaggccgccgaactcgatgtaccgctg
gtagtcgaggtaggggtgggggataactgggacgaggcgcactag
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