Halopseudomonas maritima: HV822_08530
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Entry
HV822_08530 CDS
T08633
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
harr
Halopseudomonas maritima
Brite
KEGG Orthology (KO) [BR:
harr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
harr03032
]
HV822_08530 (gyrB)
03400 DNA repair and recombination proteins [BR:
harr03400
]
HV822_08530 (gyrB)
Enzymes [BR:
harr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HV822_08530 (gyrB)
DNA replication proteins [BR:
harr03032
]
Prokaryotic type
DNA Topoisomerases
HV822_08530 (gyrB)
DNA repair and recombination proteins [BR:
harr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HV822_08530 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Clostridium_P47
Motif
Other DBs
NCBI-ProteinID:
UJJ33181
LinkDB
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Position
complement(1860570..1862984)
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AA seq
804 aa
AA seq
DB search
MTDNKAYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNSIDEALAGHCSD
IDITIHTDESISVRDNGRGIPVDAHEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVG
VSVVNALSEKLILTIRRHGKVWEQTYVHGVPQAPLAEVGDTDSTGTQIHFKPSAETFSSI
SFSWDILAKRLRELSFLNSGVGINLKDERTGKHELFRYEGGLRAFVDYLNHNKTSINSVF
HFNLQREDGIGVEVAMQWNDSFNESILCFTNNIPQRDGGTHLAGFRSALTRSLNSYIEQE
GLLKKLKVNTSGDDAREGLTAIISVKVPDPKFSSQTKDKLVSSEVKTAVEQEMNKYFGDY
LLEKPGEAKAVVGKMIDAARAREAARKAREMTRRKGALDIAGLPGKLADCQEKDPALSEL
YIVEGDSAGGSAKQGRNRRTQAILPLKGKILNVEKARFDKMLSSAEVGTLITALGCGIGR
EEFNIEKLRYHNIIIMTDADVDGSHIRTLLLTFFFRQMPELIENGYVYIAQPPLYKIKKG
KQEQYLKDDEALEEYLTQSALEDSYLYVNEDAPGITGEALERIVQQFRAVMRTLKRLARL
YPQELMEHFVYLPRLTVENLGDKAFMDEWIKGLATRVAATERSGQQYNVSLREDTERHLW
LPEVESITHGMSSYITFNRDLFASNDYRSMAELGETLQSLLEPGAYMQRGEKKKPITTFK
EALEWMMNETARRHYIQRYKGLGEMNPEQLWETTMDPESRRMLRVNIEDAIAADQIFNTL
MGDQVEPRRDFIESNALAVSNLDV
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgactgataacaaagcctatgattcatcgagtattaaggttctgaagggccttgatgcg
gtgcgtaagcgtcccggtatgtacatcggtgacaccgatgacggcactggcctccaccac
atggtctttgaagtcgtcgacaactctatcgatgaggccctcgccggccactgcagcgat
atcgacatcaccattcacaccgatgagtcgatcagcgtgcgtgacaacggacggggcatc
ccggtcgatgcgcacgaagaaggcgtatcggcggccgaggtgatcatgaccgtgttgcac
gctggcggcaaattcgacgacaacagctataaggtgtccggcggtttgcacggggtgggt
gtgtcggtagtaaacgcgctctccgagaagctgattctgaccatccgccgtcacggcaaa
gtgtgggaacagacctacgttcacggcgtaccacaggccccgttggccgaagtgggcgat
accgacagcaccggcacccagattcacttcaagccctctgccgagaccttcagcagcatc
tccttcagttgggacatcctggccaagcgcctgcgtgaactgtcgttcctcaactcgggt
gtgggcatcaacctgaaggacgagcgtaccggcaaacacgagctgttccgctatgaaggt
ggtctgcgcgcctttgttgactacctgaaccacaacaagaccagcatcaactcggtattc
cacttcaacctgcaacgtgaagatggcatcggcgtggaagtggcgatgcagtggaacgac
agcttcaacgaaagcatcctctgcttcaccaacaacattccccagcgcgacggtggtacc
cacctcgccggtttccgtagcgccctcacccgcagcctgaacagctacatcgagcaggaa
ggtctgctgaaaaagctcaaggtcaacacctccggtgacgacgcccgtgaaggtctgacc
gcgatcatttcggtcaaagtgccggaccccaaattctcttcgcagaccaaagacaagctg
gtttcctctgaagtgaaaaccgcggtcgagcaggaaatgaacaagtactttggcgactac
ctgctggaaaagcccggtgaggccaaagcggttgtcggcaagatgattgacgctgcccgt
gcccgtgaagcagcgcgcaaggcgcgtgagatgacgcgccgcaaaggggcgctggatatc
gccggtctacccggcaaactggcagactgccaggagaaagacccggccctctccgaactc
tacattgtggagggtgactccgccggcggctctgccaaacagggccgtaatcgtcgtacc
caggcgatcctgccgctcaagggtaagatcctcaacgtcgagaaggcacgcttcgacaag
atgctctcctccgccgaggtgggcacactgatcaccgcactgggctgcggtatcggccgc
gaagaattcaatatcgaaaagctgcgttaccacaacatcatcatcatgaccgatgctgac
gttgacggctcgcacattcgtaccctgctgctgaccttcttcttccgtcagatgccggag
ctgatcgaaaacggttacgtgtatatcgcgcaaccgccgctctacaagatcaagaagggc
aagcaggagcagtatctgaaagacgacgaggcgctcgaggaatacctcacccagtccgcg
ctggaagattcctacctgtacgtcaacgaagatgccccgggcatcaccggtgaagcgctg
gagcgcattgtgcagcagttccgtgcggtgatgcgtacgctcaagcgtctggcccgcctg
tacccgcaggagctgatggaacactttgtttacctgccgcgtctgaccgtcgagaatctc
ggcgacaaggcctttatggatgagtggatcaagggcctggctacccgtgtagcggcgacc
gaacgctccgggcagcagtacaacgtcagtttgcgtgaggacaccgaacgccacctgtgg
ctgccggaagtggagtccatcacccacggcatgtcgagctacatcaccttcaaccgcgat
ctgtttgcgagcaacgattaccgctccatggccgagctgggtgaaaccctgcaaagcctg
ctggagcccggcgcctacatgcaacgtggcgagaagaagaagccgataaccaccttcaag
gaagcgctagagtggatgatgaacgagaccgcgcgtcgtcattacattcagcgctacaag
gggctgggcgagatgaacccggagcagctgtgggaaaccaccatggacccggaaagccgc
cgtatgctgcgcgtgaacattgaagacgctatcgccgccgaccagatcttcaacaccctg
atgggcgatcaggttgagccgcgtcgcgactttatcgaaagcaacgctctggcggtatct
aacctggacgtttga
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