Halopseudomonas maritima: HV822_12260
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Entry
HV822_12260 CDS
T08633
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
harr
Halopseudomonas maritima
Brite
KEGG Orthology (KO) [BR:
harr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
harr03400
]
HV822_12260 (phrB)
Enzymes [BR:
harr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HV822_12260 (phrB)
DNA repair and recombination proteins [BR:
harr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HV822_12260 (phrB)
Prokaryotic type
HV822_12260 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UJJ33405
LinkDB
All DBs
Position
complement(2665931..2667355)
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AA seq
474 aa
AA seq
DB search
MQLCWLRTDLRLHDNHALWHASQQGPVVAVYVVTPNDWRAHDDAPIKIDFWRRNLIALQA
QLTERNIPLRVLHADSWADCPSQLLKLAQELEVGSLHFNDEYGLHEQSRDDATAAVFADA
GLSCQRYTDQLLFAPGSLTTQSGTMYKVYSQFRKQAYKALHRQLPDCLPAPERQTALPLD
SDPPAAGFDAFECPSEDQQALWPAGEQAALERLEHFCAELLEEYAEDRDRPDLDVTSRLS
AYLAAGVLSPRQCLHAALRVNRGEFDGGNRGAVSWINELLWREFYKHILVCYPRVSRHRA
FRPETEVVQWRTDADGLAAWQQGRTGIPLVDAAMRQLLETGWMHNRLRMVSAMFLTKNLL
IDWREGERWFMQHLIDGDLAANNGGWQWSASTGTDAAPYFRVFNPVSQSQKCDPDGSFIR
QWLPELAELAARDIHLPPQEDLLSRDHTYPAPIVDLRSSRQRAIDAFRQAGETA
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgtgctggctgcgcaccgacctgcgcctgcacgacaatcacgcgctctggcac
gccagccagcagggcccggtagtcgcggtatacgtggtcacgcccaacgactggcgcgcg
cacgacgatgcccccatcaagatcgacttctggcggcgcaacctgatcgccctgcaagca
cagctgactgagcgcaacatccccctgcgcgtgctgcacgccgacagctgggccgactgc
cccagccagcttctcaagcttgcccaggaactggaggtcggcagccttcacttcaacgac
gaatacggcctgcacgaacagtctcgcgacgacgccacagccgcggtctttgctgacgcc
ggcctcagctgccagcgctacaccgatcagctgttgtttgcgccgggcagcctgacgaca
cagagcggtaccatgtacaaggtatacagtcagttccgcaagcaggcctacaaggcgctg
catcgccagctacctgactgcctgccggcacccgaacgccaaaccgccttgccattggac
agcgacccgccagcggcaggcttcgacgccttcgaatgcccctccgaggatcagcaagcg
ctgtggcctgccggcgaacaggcagcccttgagcgcctcgaacatttctgcgccgagcta
ctggaagagtacgccgaggaccgcgaccgccctgacctggatgtcaccagccgcctgtct
gcctacctcgccgccggcgtgctgtcaccccgtcagtgcctgcacgcggcgctgcgcgtc
aaccggggtgagtttgacggcggcaaccggggcgcggtcagctggatcaacgaactactc
tggcgcgagttctacaaacacatcctggtctgctacccgcgggtatcgcgccatcgcgcc
ttccgcccggaaaccgaagtggtgcagtggcgcacagacgccgacggcctcgccgcctgg
cagcaaggtcgcaccggcatcccgctggtggacgcggccatgcgtcagctgctcgaaacc
ggctggatgcacaaccgcttgcgcatggtcagcgcgatgttcctgaccaagaacctgctg
atcgactggcgcgaaggcgagcgctggttcatgcaacacctgatcgacggcgacctggcc
gccaacaacggcggctggcagtggagtgcctccaccggcaccgacgccgcgccctacttc
cgggtattcaacccggtcagccagtcacagaaatgcgatcccgatggcagctttatccgc
cagtggttaccggagctggcagagctggccgcgcgcgacatccacctgccgccgcaggaa
gatctgctttcccgcgaccatacttaccctgcccccatcgtcgatctccgcagcagccgg
caacgcgctatcgacgccttccgccaggcaggagaaaccgcatga
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