Halopseudomonas maritima: HV822_12610
Help
Entry
HV822_12610 CDS
T08633
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
harr
Halopseudomonas maritima
Pathway
harr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
harr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HV822_12610 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
harr03019
]
HV822_12610 (rhlB)
Enzymes [BR:
harr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HV822_12610 (rhlB)
Messenger RNA biogenesis [BR:
harr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HV822_12610 (rhlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
UJJ30613
LinkDB
All DBs
Position
complement(2742334..2743863)
Genome browser
AA seq
509 aa
AA seq
DB search
MLKALKKLISKTEEPAQKPVEQTPRQAPASDKAKPGHAPSHARKARQSERQRPAKPKPAP
AKPWNINDFQVPPAEGKSRFHDFPLPDSLMRAIQDQGFSYCTPIQAAVLGSTLRGHDAIG
RAQTGTGKTAAFLVSTITQLLETPPPDERFMGEPRALIIAPTRELVMQIASDAEGLTKHC
PLNVMTFVGGMDLDKQLKQLEQRYCDILVATPGRLLDFCNRGEVHLDLLEVLVLDEADRM
LDMGFIPQVRQIIRQTPRKGDRQTLLFSATFSDDVMNLARQWTETPAVVEIEPERPASEN
VTQKVYAVSGADKYKVLYNLVTQLELDRVMVFANRKDEVRRVQERLMRDGINAAQLSGDV
PQQKRVRTLENFKSGKLQVLVATDVAGRGIHIDGISHVVNYTLPEDPEDYVHRIGRTGRA
GAKGTSISLAGEDDAFQVPPIEELLGSKLECIPPEERFLKPVPKRQQSAEEKAATDANEA
EQAAAAAAARRRSAGSNSRRGGGRPQGRH
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
gtgctcaaagcactgaaaaagctgatcagcaaaacagaagaaccggcccagaagccggtc
gagcagacaccccgtcaggcccccgccagcgacaaggcaaaacctggccatgcaccttct
cacgctcgcaaagcgcgtcagtccgaacgtcagcgaccggccaaacccaagccggcgcca
gccaagccgtggaacatcaacgattttcaggtgccaccggccgaaggcaagagccgcttt
cacgactttccgctgccagacagcctgatgcgcgccattcaggatcagggcttcagctac
tgcacgccgattcaggcagcggtgctgggcagcaccctgcgcgggcacgacgccatcggc
cgcgcccagaccggcaccggcaagacggccgccttcctggtctcgaccatcacccagctg
ctggaaacaccgccgccggatgagcgtttcatgggtgaaccgcgcgcgctgatcatcgca
cccacgcgtgagctggtgatgcagatcgccagcgacgccgaaggcctcaccaaacactgc
ccgctgaacgtcatgacctttgtcggcggcatggacctggacaagcagctcaagcagctc
gaacagcgctactgcgacatcctggtcgccaccccgggccgcctgctggacttctgcaac
cgtggcgaggtgcacctcgacctgctggaagtgctggtgctggatgaagccgaccgcatg
ctcgacatgggctttatcccgcaggtgcgtcagatcatccgccagaccccgcgtaagggc
gaccgccagacgctactgttctccgccaccttcagcgacgacgtcatgaacctggcgcgc
cagtggacagagacccccgccgtggtcgagatcgagcccgagcgcccggcctccgagaac
gtgacccagaaggtctacgccgtcagcggcgccgacaagtacaaggtgctctacaacctg
gttacccagctggagctggaccgcgtgatggtgtttgccaaccgcaaggacgaagtgcgc
cgcgtgcaggaacgcctgatgcgcgacggcatcaacgccgcgcagctgtccggcgacgtg
ccccagcaaaagcgcgtgcgcaccctggaaaacttcaagagcggcaagctgcaggtgttg
gtcgccaccgatgtggcagggcgcggcatccatatcgacggcatcagccacgtggtgaac
tacaccctgccggaggacccggaagactacgtacaccgtatcggccgcaccggccgcgcc
ggcgccaagggcacgtccatcagcctggcgggtgaagacgacgccttccaggtaccgccg
attgaggagctgctgggcagcaagctggagtgcatcccgccggaggagcgtttcctcaag
ccggtgcccaagcgccagcaaagcgccgaagaaaaggccgctaccgacgccaacgaggcc
gaacaggctgcggcggccgcggccgcccgccgccgctccgctggcagcaacagccgccgc
ggcggtggccgcccgcaagggcgtcactga
DBGET
integrated database retrieval system
