Halomonas sp. RT37: NFG58_11525
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Entry
NFG58_11525 CDS
T11872
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hart Halomonas sp. RT37
Pathway
hart03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hart00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NFG58_11525 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hart03400
]
NFG58_11525 (ung)
Enzymes [BR:
hart01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
NFG58_11525 (ung)
DNA repair and recombination proteins [BR:
hart03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NFG58_11525 (ung)
Prokaryotic type
NFG58_11525 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
DUF294
Motif
Other DBs
NCBI-ProteinID:
XBO69267
LinkDB
All DBs
Position
complement(2693197..2693880)
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AA seq
227 aa
AA seq
DB search
MVQVLPDSWERWLGAEFQAPYMQQLKAFLAAEKAARKTIYPHSSDWFRAFELTPLDEVRV
VILGQDPYHGPGQAHGLCFSVREGVKPPPSLVNIYKELAQDLGVTPVNHGHLEAWARQGV
LLLNTSLTVEEGNAGSHRGKGWETFTDRAIETVNAEAPPCVFLLWGSHARQKKALVDQER
HLVLESPHPSPLSAHRGFFGNHHFSRANAFLAEHGRSTVDWQLPPTP
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atggttcaggtattgcccgacagctgggaacgctggctcggagccgagttccaggcgccc
tacatgcagcagctcaaggcgtttctggcggcagagaaggccgccaggaagaccatctat
ccgcactcgtcggactggtttcgggccttcgagctgacgccgctggacgaggtacgagtg
gtgatcctggggcaagatccctaccacggtcctggccaggctcatgggttatgcttttcg
gtgcgcgagggcgtcaagccgccgccgtcgctggtcaatatctacaaggagctggcccag
gacctgggggtgacgccggtcaaccacggccacctcgaggcctgggcgcgccagggggtg
ttgctgctcaacacctccttgacggtggaggagggcaacgccggctcccaccggggcaag
ggatgggagaccttcaccgaccgcgccatcgagaccgtcaacgccgaggcgccgccctgt
gtctttctgctgtggggcagccacgcccgccagaagaaggcgctggtggatcaggagcgt
catctggtactggagtcgccgcacccgtcgccgttgtcggcccaccgcggctttttcggc
aatcaccatttctctcgggccaacgcctttctcgccgagcacgggagatccacggtggat
tggcagctgccgccgactccctga
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