Halomonas sp. RT37: NFG58_14715
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Entry
NFG58_14715 CDS
T11872
Name
(GenBank) collagen-like triple helix repeat-containing protein
Organism
hart Halomonas sp. RT37
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Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen_mid
DUF4223
Motif
Other DBs
NCBI-ProteinID:
XBO69866
UniProt:
A0AAU7KDV7
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Position
3368498..3370780
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AA seq
760 aa
AA seq
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MTLQRKLLVIALASAMATLTACSGDSSNSRTLASNSQDPITSGGDDGSGGAGGDGGSGGD
GGSGGDGGSGGDGSGGDGSGGDGSGGDGGDGDGSDGGDGGDGIARSSLEGVFLATADTSD
GVDTTLTDIGNGISQQSAVPQLASVTEPAGTIVSETGDAVGDISSGIRDGVGSLSTNDNY
LGTTAAGVTNGVGELGQAVSATGDTVAGLGELPVVMELDARTGLVTKLGTTVNGLGGKVE
RAGDALSVNFEDSSEVLGATTTKLGVALRPVLLGTDGKVTRVGQALVLPAQAGNLLLRTG
GTLADLGQRIGERYSLLGGAGDSVTGSGNIVIATGELLGGGEGDNGSGGGLGGLLDGDTS
APEDGRTDLERTVASAGQTGAGAGDAVTALGDGISQQSLGGRGDFVTDGLGNVISNGGQA
VSGLSNGLDNGLGNFSNNPNAVGTTLADGGVAVSETGEVVSSLGATVGNLNQLPLVMQLD
NRSGAITQLGSSVAALGGGVTQAGNVLTLNFNDDGSHLGGLTREVSAVLRPVVIQTDSGV
TQLSQALVVGPEVGNVLIQAGVAVDGLGGRLGQGNDLAAGVGGAVSGVGGIAANTGRLLG
GDEARLLSRLDGQGLSQLESAGLLGQGALLSDLGGSQQGGLGGGLEAGLGDQLGGDSNLI
AGLNDTLGGGSGLTAGLGDTLGGDSGGGLVSGVSDTLTSTLGGGDSDSGGGLVGGTLDAV
GGVTEKLTGDMGSSQDGSSNDSSSNDGLVSNVLGGLLGRN
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgactttgcaacgaaaactactcgttattgctctcgccagcgcgatggcgaccctgacc
gcctgctctggtgattccagcaactctcgcaccctggccagtaacagccaggacccgatt
accagcggtggcgacgatggctccggtggcgccggtggcgatggcggctcaggtggcgat
ggcggctccggtggcgatggcggctccggtggcgatggctccggtggtgatggctccggt
ggcgatggctccggtggcgatggcggcgatggtgatggatccgacggcggcgatggcggc
gatggcattgcccgctcatcgctggaaggtgtattcctggcgacagccgataccagcgac
ggtgtagacaccacgcttactgacatcgggaacggcatctcccagcagagcgccgtccct
caattggccagcgtcaccgaacctgcaggtacgatcgtctccgaaacgggcgatgcggtc
ggcgacatctcgagcggcatacgcgatggtgtcggcagcctcagtaccaatgacaactat
ctgggcaccaccgccgcaggcgtgaccaacggtgtcggcgagcttggacaggcagtttcg
gcgacaggagacaccgttgccggcctgggcgaactgcccgtagtgatggaactcgacgcc
cgaacaggactggtgaccaagctcggtaccaccgtcaatgggctcggcggcaaggtggag
cgcgcaggcgacgcactcagcgttaatttcgaggattccagcgaggtgctcggggccacc
actaccaagcttggtgttgcccttcgtcctgtgctgctgggcaccgacggcaaggtcaca
cgcgtcggtcaagcgctggtgttgccggcccaggccggcaacctgctgctacgcaccggt
ggcaccctggccgacctcggtcagcgtatcggtgaacgctactctctgcttggcggcgcc
ggcgatagcgtgaccggcagcggtaatatcgtcatcgcgaccggcgagctgctcggcggg
ggtgaaggcgacaatggctcaggcggcggcctcggcggactgctcgatggcgataccagc
gcgcctgaagacggccgcaccgacctggagcgcaccgtcgccagcgcaggacagaccggc
gccggtgctggagacgcggtcaccgccctgggcgatggcatttcgcaacaaagtctggga
ggacgtggagatttcgtcaccgacgggctgggcaatgtcatcagcaatggcggccaagcc
gtatccgggctcagcaacggactcgacaatggtctgggcaacttctcgaataaccccaac
gctgtgggaaccaccttggccgacggcggtgtagcggtctccgaaaccggagaggtggta
tccagcctcggcgccaccgtcggcaacctgaaccagctccccctggtcatgcagctcgac
aaccgcagcggcgccatcacccagctcggcagcagcgtcgcggcccttggtggcggcgtg
acccaggccggtaacgtgctgaccctgaacttcaacgacgatggctcgcaccttggtggc
ctgacccgcgaagtgtcggcggtattgcgccccgttgtcatccagacggatagcggcgtt
acccagctcagccaggccctggtggtcggccccgaggtaggcaacgtgctgatccaggcc
ggcgtagcggtagatggactgggtggccgcctgggccagggcaatgacctcgccgctggc
gtgggtggtgctgtcagtggtgtcggaggcatcgccgccaacaccggcagactgctgggc
ggtgatgaggctcgactgctttcacgcctcgatggtcagggactcagtcaactggaatct
gccggactgctgggccaaggggctctgctctcggacctcggaggaagccagcaaggcggc
ctcgggggcggactcgaggcagggcttggcgaccagcttggtggtgacagcaacctcatc
gccggactcaacgatacgctgggcggcggcagcggcttgaccgcagggcttggcgacacc
ctcggtggcgacagtggcggcggcctggtctctggcgtctccgacaccctgaccagcacc
ctcggcggtggcgacagcgacagcggcggtggcctggtcggcggcaccctggacgccgtc
ggtggcgtgaccgagaagcttaccggtgacatgggtagcagccaggacggcagcagtaac
gactccagcagcaatgacggcctggtcagcaacgttctgggaggactgctgggcagaaac
tga
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