Halomonas sp. RT37: NFG58_17710
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Entry
NFG58_17710 CDS
T11872
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
hart Halomonas sp. RT37
Pathway
hart03030
DNA replication
hart03430
Mismatch repair
hart03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hart00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NFG58_17710 (dnaE)
03430 Mismatch repair
NFG58_17710 (dnaE)
03440 Homologous recombination
NFG58_17710 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hart03032
]
NFG58_17710 (dnaE)
03400 DNA repair and recombination proteins [BR:
hart03400
]
NFG58_17710 (dnaE)
Enzymes [BR:
hart01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NFG58_17710 (dnaE)
DNA replication proteins [BR:
hart03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NFG58_17710 (dnaE)
DNA repair and recombination proteins [BR:
hart03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NFG58_17710 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
Motif
Other DBs
NCBI-ProteinID:
XBO70423
UniProt:
A0AAU7KHQ1
LinkDB
All DBs
Position
complement(4086445..4089954)
Genome browser
AA seq
1169 aa
AA seq
DB search
MSAPFVHLRVHSEFSLVDGLVRLKPYVKAGIEHGAPALALTDEANLFGLVKFYNGVQGAG
MKPVIGADLWLVNGHDLDHPYRVTLLAMNDVGYRNLTELISRGWVEGQRQGRAYLEKAWV
LEQNEGLIALSGGRDGDVGRHLLSDLHADARRLLDDWCQAFPGRFYLELTRTGRPLEEDC
VHASVALALDTGVPVVATNDVRFLKREDFWAHETRVSIGEGKALDDPRRERRYTEEQYLK
SPQEMAELFADIPEALENSVMIAARCNVDVRLGEIFLPEYGIPEGMTQDEFFRKISHDGL
TERLEALYPVAHHPRDSDEWAALEQRYRERLDFELNIILQMGFPGYFLIVMDFIQWAKDN
DVPVGPGRGSGAGSLVAYAQKITDLDPIQYDLLFERFLNPERVSMPDFDVDFCMEKRDRV
IDYVAERYGRNAVSQIVTFGTMAAKAVVRDVARAQGKPYSLGDKLSKLIPFEVGMTLAKA
IEEEPQLKEFLEADEEAQEIWDMALKLEGVTRGTGKHAGGVVIAPTKLTDFSPLLCDEDG
SGLVVQFDKNDIEDAGLVKFDFLGLRTLTIIDWALEMVDKVRSKEGQGPLDIDTIPLDDG
KTFEMLKKAETTAVFQLESRGMKELIKRLLPDSLEDMIALVALFRPGPLQSGMVDDFINR
KHGRAEISYPHPDYQHDLLKPVLQPTYGIILYQEQVMQIAQVMAGYSLGQADLLRRAMGK
KKPEEMAKQRAGFMEGCAANGIDADLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWL
KAHYPGPFMAAVMSTEMDNLDKVVPLIEECRHLKLTVTPPDVNVGGYKFTVDEEGRVVYG
LGAIRGVGEGPIGAIVEARSADGPFSDLFDFCRRIDPKRMNKRTLEALIRSGALDNLGPN
RAVLAASLDDALKAAAQSHKNQSAGMMDLFGEAFAPDEDDSASDPYADYLRVREWSDRER
LAGEKDTLGLYLTGHPIDEYEEELSRFVSTRIADLKPSREPQRVAGLVVAQRTMKSKRGD
TMAFVTLDDRTGRIEASLFGELYDSVREQLDNAEVLIIEGEVSSDDYSGGLRLRGKEVTP
MVQARSRFGQAVEVSVDGREANGRLIDSLRTSLEPHRHQEGLPVRLRYRNLEATGWLELD
EQWKVLPSDDLLIALREVEGQDGVRLKYR
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgtccgctcccttcgttcatcttcgcgtccacagcgagttctccctcgtcgatggcctg
gtgcgcctcaagccgtacgtcaaggcgggcatcgagcacggggcgccggcgctggcgctg
accgacgaggccaacctgttcggcctggtgaagttctacaacggtgtccagggcgccggc
atgaagccggtcatcggcgcagatctgtggctggtcaacggccacgacctggatcacccc
tatcgggtgaccctgctggcgatgaacgacgtcggctaccgcaatctgaccgagctgatc
tcgcgtggctgggtcgagggccagcgccaggggcgggcctacctggagaaggcctgggtg
ctcgagcagaacgaggggctgattgcgctgtctggtggtcgcgatggcgatgtcggtcgc
cacctgctcagcgatcttcacgccgatgccaggcgcctgctggacgactggtgccaggcc
ttcccgggacgtttctatctggagctgacccgtaccggccgcccgctggaagaagactgc
gtacacgcctcggtggcgctggcgctggacaccggggtgccggtggtggccaccaacgac
gtgcgctttttgaagcgtgaggacttctgggcccacgagacccgggtctccatcggtgag
ggcaaggcgctcgacgatccccgacgtgagcgccgttacaccgaagagcagtacctgaag
tcgccccaggagatggccgagctgttcgccgatatccccgaggcgctggaaaacagcgtg
atgatcgccgcgcgctgcaacgtcgacgtgcgtctgggcgagatcttcctgccggagtac
ggcatccccgagggcatgacccaggacgagttcttccgcaagatctcccacgacggtctg
accgagcgcctcgaggcgctctatccggtggcgcatcacccccgcgacagtgacgaatgg
gcggccctcgagcaacgctaccgcgagcgcctggacttcgagctgaacatcattctgcag
atggggttccctggctacttcctgatcgtgatggactttatccagtgggccaaggacaac
gacgtgccggtggggccggggcgggggtccggtgccggctcgctggtggcctacgcccag
aagatcaccgacctcgacccgatccagtacgacctgctgttcgagcgcttcctcaacccg
gaacgtgtctccatgcccgacttcgacgtcgacttctgcatggagaagcgcgaccgggtc
atcgactacgtggccgagcgctatggccgcaacgcggtgtcccagatcgtcaccttcggc
accatggccgccaaggcggtggttcgcgacgtggcccgggcccagggcaagccctattcg
ctgggtgacaagctgtccaagctgatccccttcgaggtcggcatgacgctggccaaggcc
atcgaggaggagcctcagctcaaggagttcctcgaggccgacgaggaggcccaggaaatc
tgggacatggcgctcaagctcgagggcgtgacccgaggcaccggcaagcacgccggtggc
gtggtgatcgcccccaccaagctgaccgacttctctccgctgttgtgcgatgaagacggc
tccggcctggtggtgcagttcgacaagaacgatatcgaggacgccggcctggtcaagttc
gactttcttggcctgcgtaccctgaccatcatcgactgggccttggagatggtcgacaag
gtgcgctcgaaggagggccagggaccgctcgatatcgacaccattccgctggatgacggc
aagaccttcgagatgctcaagaaggccgagaccactgccgtgttccagctcgaatcccgt
ggcatgaaggagctgatcaagcgcctgctgccggactcgctggaggacatgatcgccctg
gtggcgctgttccgtcccggtccgcttcagtccggcatggtcgacgacttcatcaaccgc
aagcacggtcgggcggagatctcctatccgcacccggactaccagcatgatctgctcaag
ccggtgctgcagcccacctacggcatcatcctgtaccaggagcaggtgatgcagatcgcc
caggtgatggccggctactcgctgggccaggccgacctgttgcgtcgtgccatgggcaag
aagaagccggaagagatggccaagcagcgcgccggcttcatggagggctgcgcggccaac
ggcatcgatgccgacctggcgggcaacatcttcgacctggtggagaagttcgccggctac
ggcttcaacaagtcgcactccgccgcctacgccctggtgtcctaccagaccgcctggctc
aaggcccactatccgggtcccttcatggcggcggtaatgtccaccgagatggacaacctc
gacaaggtggtgccgctgatcgaggagtgtcgtcacctcaagctgacggtgaccccgccg
gacgtcaatgtcggtggctacaagttcaccgtcgacgaagaggggcgggtggtctacggc
ctgggcgcgatccgtggggtgggcgaaggtcccatcggcgccatcgtcgaggcgcgcagc
gcagacggccccttcagcgacctgttcgacttctgtcggcggatcgaccccaagcgcatg
aacaagcgtaccctggaggccttgatccgctccggggcgctggacaacctggggccaaac
cgcgccgtgctggccgcctcgctggatgacgccctgaaggccgcggcccagagccacaag
aaccagagcgccgggatgatggatctgtttggcgaggccttcgccccggacgaggacgac
agcgccagcgatccctacgccgactatctgcgcgtgcgggagtggagcgaccgcgagcgc
ctggccggcgagaaggacaccctggggctctatctgaccggccatcccatcgatgaatac
gaggaagagctttcgcgtttcgtctcgacccgcatcgccgacttgaaaccgtctcgcgag
ccccagcgggtcgccggcctggtggtggcccagcgcaccatgaagtccaagcgtggcgac
accatggcgttcgtgaccctggacgaccgtaccggacgcatcgaggcgtcgctgttcggt
gagctctacgacagcgtgcgcgagcagctcgacaacgccgaggtgctgatcatcgaaggc
gaggtgtccagcgatgactactccggcggcctgcgcctgcgcggcaaggaggtcaccccc
atggtccaggcgcgctcgcgcttcggtcaggcggtggaggtctcggtggatgggcgtgag
gccaacggtcgactgatcgacagcctgcgcacgagcctcgagccgcatcgtcaccaggaa
ggcctgccggtgcgcctgcgctaccgcaatctggaggccaccggctggctcgaactcgac
gagcagtggaaagtgctgccatccgacgacctgctgatcgcgctgcgtgaggtcgagggc
caggacggcgtccgcctcaagtatcgctag
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