Halomonas sp. RT37: NFG58_21325
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Entry
NFG58_21325 CDS
T11872
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hart Halomonas sp. RT37
Pathway
hart03420
Nucleotide excision repair
hart03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hart00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NFG58_21325 (uvrD)
03430 Mismatch repair
NFG58_21325 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hart03400
]
NFG58_21325 (uvrD)
Enzymes [BR:
hart01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NFG58_21325 (uvrD)
DNA repair and recombination proteins [BR:
hart03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NFG58_21325 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
NFG58_21325 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_12
AAA_22
Motif
Other DBs
NCBI-ProteinID:
XBO71098
LinkDB
All DBs
Position
complement(4875811..4878015)
Genome browser
AA seq
734 aa
AA seq
DB search
MDDVTAIIDGLNAAQHEAVCAPQGNMLVLAGAGSGKTRVLVHRIAWLMQAEGLSPYAVLA
VTFTNKAAREMRTRLEALLGISLRHVWVGTFHSIAHRLLRTHWQDARLPQHFQIIDSDDQ
LRLIKRLLKDNKIDDERFPPRQVQSFISGCKEEGLRPHQVRINGDAYVEQMVALYDVYQL
TCERGGLVDFGELLLRSLELLRDNPALLAHYQERFAHVLVDEFQDTNTLQYAWLKLLTGQ
RTPMTVVGDDDQSIYGWRGARVENIRRFEQEFSDTKTVRLEQNYRSTSAILDAANALIKQ
NSDRMGKELWTAGSRGEPISVYAGFNDMEEARFIVDTIKEKVDEGFKRQEVAILYRSNAQ
SRVIEETLIRQGMPYRIYGGQRFYERLEIKNALAYLRLLLNRDDDASLERVINVPARGIG
TRTVEGLRDRARRTEVSLWQAIHDTLAEGSLKGRAANAVGAFANLIEGLDNDTSGMALHE
IIAHVNQRSGLIDHHLSEKGEKGQARVENLEELINAARAFTQGETLDNVEAGEGMAALEA
FLAEAALNAGEHEADEFEDSVQLMTLHSAKGLEFPIVFVAGVEEGLFPHRMSLEEPGRLE
EERRLCYVGVTRAMQKLYLTHAEIRRMHGKETFQRPSRFLRELPESLLEEVRLRGQVSRP
VSARPAPSRFAQTTVEASGDLPALSLGQRVRHPVFGEGVILNAEGEGERARVQVSFEGHG
DKWLVLGFAKLEAL
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgtcacggcgatcatcgacggcctcaatgcggcgcagcatgaggcggtctgc
gctccccagggcaatatgctggtgctcgccggcgccggttctggcaagacccgcgtgctg
gtccatcgcatcgcctggctgatgcaggcggaaggtctctcgccctacgcggtgctggcg
gtgaccttcaccaacaaggccgccagggaaatgcgcactcgcctggaggcgttgctgggg
atctcgctgcgccacgtctgggtgggtacctttcactccatcgcccaccgcctgctgcgt
acccattggcaggacgctcgtctgccccagcacttccagatcatcgactccgatgatcag
ctacgtctgatcaagcgcctgttgaaggacaacaagatcgacgacgagcgttttccgccc
cgtcaggtgcagtcgtttatcagcggctgcaaagaggagggattgcgtcctcaccaggtc
cggatcaacggtgacgcctacgtggagcagatggtggcgctgtatgacgtctaccagctg
acctgcgaacgtggcggcctggtcgactttggcgagctgctgctcaggagcctcgagctg
ttgcgcgacaatcctgctctgctggcccactatcaggagcgcttcgcccacgtactggtc
gacgagttccaggataccaacaccctgcagtatgcctggctgaagctgttgaccggacag
cgcacgccgatgacggtagtcggcgatgacgaccagtcgatctacggctggcgcggggca
cgggtggagaacattcgtcgcttcgagcaggagttcagcgacaccaaaacggtgcgcctg
gagcagaactatcgctccaccagcgccatcctcgacgccgccaacgccctgatcaagcag
aactcggatcgcatgggcaaggagctgtggaccgccggcagtcgtggcgaaccgatttcg
gtctacgccggtttcaacgacatggaggaggcgcgcttcatcgtcgacaccatcaaggaa
aaggtcgacgaggggttcaagcgccaggaggtggccatcctctatcgctccaacgcccag
tcccgcgtcatcgaggagaccctgatccgccagggcatgccctaccgcatctacgggggc
cagcgcttctacgagcgcctcgagatcaagaacgccctggcctacctgcggctgctgctc
aaccgcgacgacgatgcctcgctggagcgggtgatcaatgtccctgcccgcggtatcggt
acccgcaccgtggagggactgcgcgatcgtgcccgtcgtaccgaagtgtcgctgtggcag
gcgatccacgacaccctggccgaaggctcgctcaaggggcgtgcggccaacgccgtgggt
gcctttgccaatttgatcgaaggcctcgacaacgacacctcggggatggcgcttcacgag
atcatcgcccacgtgaatcagcgcagtggactgatcgaccatcatctgagcgagaagggt
gaaaaggggcaggcccgggtcgagaacctggaagagctgatcaacgccgcccgtgccttc
acccagggtgagacgctggacaacgtcgaagcgggggagggcatggccgcgctggaagcc
tttctggccgaagctgccctcaacgccggcgagcacgaggccgacgaattcgaggacagc
gtccagttgatgacgctgcactcggccaagggactcgaatttcccatcgtgttcgtggcc
ggggtcgaggaaggcctgtttccccaccgcatgtcgctggaagaacccgggcgcctggag
gaggagcgcaggctctgctacgtcggggtcacgcgcgccatgcagaagctctacctcacc
cacgccgagatccggcgcatgcatggcaaggagacctttcagcgcccgtcacgctttctg
cgtgagctgccggagtcgctgctcgaggaggtgcgtctgcgtggccaggtatcgcgtccg
gtcagcgcccggccagcgccgtcgcgcttcgcccagacgaccgtggaggcgagcggcgat
ctacctgccttgtcgctgggccagcgggtgcgccatccggtattcggtgagggggtcatc
ctcaacgccgaaggagagggcgagcgggcccgtgtccaggtcagcttcgaaggccacggc
gacaagtggctggtgctgggcttcgccaagctggaggcactgtag
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