Halanaerobium hydrogeniformans: Halsa_0225
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Entry
Halsa_0225 CDS
T01349
Name
(GenBank) Type II site-specific deoxyribonuclease
KO
K03573
DNA mismatch repair protein MutH
Organism
has
Halanaerobium hydrogeniformans
Pathway
has03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
has00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Halsa_0225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
has03400
]
Halsa_0225
DNA repair and recombination proteins [BR:
has03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Strand discrimination factor
Halsa_0225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutH
Motif
Other DBs
NCBI-ProteinID:
ADQ13709
UniProt:
E4RNN1
LinkDB
All DBs
Position
266084..267514
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AA seq
476 aa
AA seq
DB search
MVYYDISSSESIEKHAKKLEGSSINDLYSRYGCLNEKNKGRLGLLVERLHFGFENNSDER
PDFPKAGDNGVELKVVPIKKIRENKSSDMIIKKEGLSVKERLVIKKIDYFKLAEEDWDDN
TLLPKITLLLLMFYMYKEGLNVVDYKFLLVSLWTIPEKDMNIIRDDWKKIKRKIEKGDAH
KISEGDTLYLGACTKAASSSDRTAQPYSEHEAKPRAFSLKRSYMDEVFNSLYKKRSDRKE
KALLDTEMSLKEKLQDIFEPYIGMRVDEIEKQLEVDLGTSKQYLNILANEIMGVDSEDNI
EEFNKAGIKIKTMRLNRKGIPIESLSLPTFDYIELKESDWLHSELYERLENTKYFFVIFD
KIGVQNTKKNLKLKKVKLWNMPAEDIEKARPVWEEMHDIMVKGKDGKGIIKKVTKNGIRR
TNFPAKSHRLSEVIHVRPHAKNKKDTSPLPDTFDMQGYTKHSFWFNNDYIAEQINA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggtttattatgatataagttcctccgaatccatagaaaaacatgcgaaaaaactcgaa
ggtagtagcataaatgatctttattcgagatacggctgtttgaacgaaaagaacaaaggg
cgtttgggtttattggtcgaaaggttacattttggattcgaaaataattccgatgagagg
cctgattttcctaaagctggtgataacggtgtcgaactgaaggtggttccgatcaagaag
atcagggaaaacaagtcttctgatatgatcattaaaaaagaagggttatccgttaaagaa
agattggttataaaaaaaatagattatttcaagttggcagaggaagattgggatgataat
actttgcttcccaagataaccttgttattattgatgttctatatgtataaggaaggactt
aatgttgttgattataaatttttgttggtcagtttatggaccatacctgagaaagacatg
aatataattagagatgattggaagaagataaaacgcaaaatagagaaaggagatgctcac
aaaatatctgaaggagatactctatatttgggtgcctgcacgaaagcagcatcttcttct
gatagaacagcccaaccttattctgaacacgaagcaaaaccgagagcgttttctcttaaa
agaagctatatggatgaagtgtttaatagtttgtataaaaaaagaagtgataggaaagaa
aaggcgcttttggatacagaaatgtcattaaaagaaaaattgcaagatatatttgaacct
tatattggaatgagggttgatgagatagaaaaacaactcgaagttgacttaggtacttca
aaacaatacctaaatattttggctaatgaaataatgggagtagattcagaagataacata
gaggaattcaataaagcgggaatcaagattaagactatgcgtctgaatagaaaaggtata
cctatcgagagtctgtccttaccgacattcgactatatagaactgaaagaatcggattgg
ttgcattccgaattgtacgaaaggttagaaaatacgaaatattttttcgtgatattcgat
aaaataggagtacagaatactaagaaaaatttaaagcttaaaaaagttaaattgtggaat
atgcctgcagaagatatagaaaaagctcgacctgtttgggaagaaatgcatgatataatg
gtgaaaggtaaagacgggaaggggataataaaaaaggtaacgaaaaacggtattagacgg
actaattttcccgccaaaagccatagattaagcgaggttatacatgtcagaccccatgct
aaaaacaaaaaagacacatctccactacccgacacattcgatatgcaaggatacactaaa
cattccttttggttcaacaacgactatattgccgaacaaataaatgcatga
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