Halanaerobium hydrogeniformans: Halsa_0336
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Entry
Halsa_0336 CDS
T01349
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
has
Halanaerobium hydrogeniformans
Pathway
has03030
DNA replication
has03430
Mismatch repair
has03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
has00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Halsa_0336
03430 Mismatch repair
Halsa_0336
03440 Homologous recombination
Halsa_0336
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
has03032
]
Halsa_0336
03400 DNA repair and recombination proteins [BR:
has03400
]
Halsa_0336
Enzymes [BR:
has01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Halsa_0336
DNA replication proteins [BR:
has03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Halsa_0336
DNA repair and recombination proteins [BR:
has03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Halsa_0336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DnaX_C
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
TIP49
AAA_22
AAA_30
ResIII
AAA_16
AAA_5
AAA_14
AAA_2
Rad17
AAA_24
AAA_19
AAA_7
Mg_chelatase
AAA_6
Striatin
AAA_assoc_2
Motif
Other DBs
NCBI-ProteinID:
ADQ13811
UniProt:
E4RPC6
LinkDB
All DBs
Position
396381..398189
Genome browser
AA seq
602 aa
AA seq
DB search
MSFLSLYRKYRPEDFTDLIGQDHVVQTLKNALKNDRVAHAYLFAGPRGTGKTSTAKVFAK
ALNCADPAADLEPCGECNSCQRISSGSSLDVIEIDAASNRGIDEIRELREKVKFYPGEGQ
YKVYIIDEVHMLTTGAFNALLKTLEEPPDSVVFILATTEPHKVITTIMSRCQRFDFTLLS
LGDIKMRLKYIAEQEGYEIDAAALDILARSARGGMRDGISLLDQAISFSDGQLAAEEIAR
MLGRVNKDKLKEFLLYLSKNQSQKALQLLDKQLEAGLGIERFSDELVAYCRELLLIKECG
VNSGILEYSQSYLEELADAAANLSTTRITNIIDEFAKLKQKLRSSASPRLQLEISVIKLS
SKQSAESSLEARLSQLEFKLNDLLQKGSIAVNKEVQKPVQPEVENRAKKSSSKQAETQAE
STQNKKAAQPEQKKAVPAQKEANSAEGDLSLEKVKNYWAKLLSEIRKRDISVQALLREAE
PTAVEGKKIIIVFPEDKKFHFKGARSNQSLISNVIGSLLNQYVELEFILGDYKKKSLNEQ
KSSQSRSDKAAGENTNFQSSTSAKKSSQRDKNQSFGIKEIARIFSGEIIEVDETILEKKG
GN
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttctctctctttacagaaaatatcggccggaagattttacagatttgatcggt
caggatcatgtggtccagaccttaaaaaatgccttaaaaaatgatagggtggcccatgct
tacctctttgccggacctcgcggtacaggtaagacttctactgccaaggtttttgctaaa
gccttaaattgtgcagatccagcagctgatttagaaccctgtggagagtgtaattcctgt
cagaggatcagcagtggtagttcacttgatgtaatcgaaattgatgctgcttctaacagg
ggtattgatgagataagggagttaagagaaaaggttaaattttatccaggagaaggacag
tataaggtatatataatcgatgaagtacatatgttaacaacaggagcttttaatgccctt
ttaaaaactcttgaagaaccacctgatagtgttgtttttatcctggcaactacagaacct
cataaggttattacgaccattatgtccagatgtcagcgctttgattttactttactgagc
ctgggagatataaaaatgaggttaaaatatatagctgagcaggaaggttatgagatagat
gcagcagctctcgatatattagcccgcagtgctcgaggtggtatgagggatggaataagc
cttttagatcaggcaatatcttttagtgatggtcagcttgccgctgaagaaatcgcccgg
atgctgggcagggttaataaggataaattaaaagaatttttactttatttaagcaaaaat
cagagtcaaaaagctctgcagttattggataaacagcttgaggctggtttaggtatagaa
agatttagtgatgaactggtagcttactgtagagaactgcttttaataaaagagtgtggg
gttaactcaggtattttagagtactcccagagttatttagaagagctggcagatgctgcc
gccaatttaagcacaactcggatcaccaatattatagatgagtttgctaaattgaagcaa
aaactgcgttccagtgcaagcccccgtttacaattggagataagtgttataaaattaagt
agtaagcagagtgcagaatcttctcttgaggccagactttctcagctggaatttaaatta
aatgatctgctgcaaaaaggaagtatagctgtcaacaaagaagttcaaaagccagttcag
ccagaagttgaaaacagagctaaaaaatcaagcagcaagcaagcagaaactcaagcagaa
agcactcaaaataaaaaagctgctcaacctgagcaaaaaaaggctgtaccagctcaaaag
gaagctaattctgccgaaggagatctcagcctggaaaaagtaaaaaattactgggcaaag
cttttaagtgaaattagaaaacgcgatatttcagttcaggctttattaagagaagctgaa
ccaactgctgttgaaggcaaaaagatcatcatcgtgtttccagaagacaaaaaatttcac
tttaagggagcaaggtcaaatcagtccctgatctctaatgttatcggcagtcttttaaat
caatatgttgaattagaatttatacttggtgattataaaaaaaaatcgctaaatgagcaa
aaaagcagtcaaagtagaagtgataaagcagctggagaaaatactaactttcaaagttct
acttcagccaaaaaaagctctcaaagagataaaaatcagagttttggcataaaagaaatt
gccagaatattttctggagagataattgaagttgatgaaacaattttagaaaaaaaagga
ggcaactaa
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