Halanaerobium hydrogeniformans: Halsa_0837
Help
Entry
Halsa_0837 CDS
T01349
Name
(GenBank) Squalene/phytoene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
has
Halanaerobium hydrogeniformans
Pathway
has00100
Steroid biosynthesis
has00909
Sesquiterpenoid and triterpenoid biosynthesis
has01100
Metabolic pathways
has01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
has00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
Halsa_0837
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
Halsa_0837
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
has01006
]
Halsa_0837
Enzymes [BR:
has01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
Halsa_0837
Prenyltransferases [BR:
has01006
]
Terpene biosynthesis
Squalene/phytoene synthase
Halsa_0837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
ADQ14284
UniProt:
E4RN67
LinkDB
All DBs
Position
957023..957997
Genome browser
AA seq
324 aa
AA seq
DB search
MRDTPIKFAKNILKDVSRSFALTIPMLDKIIKDEVLVNYLQDRILDNFEDEIQPPDLKLQ
KRMMDKVSRIFSPEDYDRQEDFKEIKAKSALIKDADLSRLNYNIDIIYQAYQSFDLETQK
ISHKWLQEMKLGMQKYLTKTVENFTELDEYCYYVAGTVGGFLTELIIYKLDFAAEDKEIL
LDNFNEAGLFLQKVNLIRDIKDDLENREKHFWPLKELNITEEELLNRENESRVMEALDKM
LDDLLKHTAALKKYYHALPQSLSGYKKFFAVNNALGLATVEKLRDNTAVFYGDKAVKVSK
LAFANILRAPEKYFLKYCSKYITD
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagagatactccaattaaatttgctaaaaatatattaaaagatgtttcccgaagcttt
gctttgaccattcccatgctcgataagatcattaaagatgaggtgcttgttaattatctt
caggataggattcttgataactttgaagatgaaattcaacctccagatcttaagttacaa
aagaggatgatggataaggtaagcagaatattttcacctgaagattatgatcgtcaggaa
gattttaaagaaattaaagctaaaagtgctttaattaaggatgcagatttatctcgctta
aattataatattgatataatttatcaggcatatcaaagcttcgacttagaaactcaaaaa
atatcacataagtggctgcaggaaatgaagctgggaatgcaaaaatatttgactaaaacg
gtagaaaactttacagaactggatgaatattgttattatgtagctggaacggttggtggt
tttttgactgagctgatcatctacaaattagattttgctgcagaagataaagagattttg
ctggataattttaatgaggccggtctatttttacaaaaagttaatctgatcagggatatc
aaagatgatttagaaaatagagaaaaacacttctggcctttaaaggaattaaatattaca
gaagaagaactgctcaacagagaaaatgaatctagggtgatggaagctttagataaaatg
ctggatgatttactcaaacatacagcagctttaaaaaaatactatcatgctctaccacaa
agtttgagcggctataagaagttctttgcagttaataatgctcttggcttagctacggtt
gagaaattacgggataatacagctgttttttatggtgataaagctgttaaggtttctaaa
ttagcctttgccaatattttgcgagcaccagagaaatattttttaaaatattgttctaaa
tacataacagactaa
DBGET
integrated database retrieval system
