Halanaerobium hydrogeniformans: Halsa_0965
Help
Entry
Halsa_0965 CDS
T01349
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
has
Halanaerobium hydrogeniformans
Pathway
has02020
Two-component system
has02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
has00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Halsa_0965
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Halsa_0965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
has03021
]
Halsa_0965
Transcription machinery [BR:
has03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Halsa_0965
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Xre-like-HTH
HTH_3
DUF5125
Motif
Other DBs
NCBI-ProteinID:
ADQ14411
UniProt:
E4RM80
LinkDB
All DBs
Position
1098059..1099153
Genome browser
AA seq
364 aa
AA seq
DB search
MQLDFDLNLEQKQELVLTPKLQMAIEILQYSNLELKDYIEEEMKENPLLDMLEAEKEMDY
RQSNFNVIEKDRIQYENFVAYRPDFCEYLENQLFEVLSDEQIELGKFIVGSLNQSGCLSI
EPEKIAEILSRTEKEVLEVYDKIKELDIKSADDLKNCSTEYIDPDLIVKEKDGDFEIISN
DKSYPTLRISSYYYNLLKNQDDEEISDYLKRKYQSAIWLMKSIEQRRETIRKIVETIVEK
QRDFFKKGLKHLYVMTMEEVAEAIDMHESTVSRATTSKYLQTPHGIFSLKLFFNSGINNI
SSVSIKAIISEEIAKEDKNSPLSDSSLAEILMTEYSLDISRRTVAKYRKSLGIPCSRKRK
KNFK
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttgactttgacttaaatctagaacaaaaacaggagctggtcttaactcctaaa
ttacagatggcgattgaaattctgcagtatagcaatttagaattaaaagactatatcgag
gaagaaatgaaagaaaatcctctcttagacatgttagaggctgaaaaagaaatggattat
aggcaatctaatttcaatgttattgaaaaagataggatacagtatgagaactttgtagct
tacaggccggatttttgtgaatatcttgaaaatcaactttttgaagttttatctgatgaa
caaatagaactgggcaaatttattgttggtagtttaaatcagtctggctgtttatccata
gaacctgaaaaaattgcagaaatcttatctagaactgaaaaagaagtattagaagtctac
gataaaataaaagaactggatataaaatcagcagatgatttaaaaaactgcagcacagaa
tatattgatcctgatttaatagttaaagaaaaagatggtgattttgagattatctcaaat
gataaatcatatcctaccctaaggattagttcgtattattataacctgctcaaaaatcag
gatgatgaagagataagtgattatttaaaaagaaagtatcagtctgctatctggttgatg
aaaagtattgagcagcgcagagagacgattagaaagattgtcgaaaccattgttgaaaaa
cagagggatttttttaaaaaaggtttaaaacatctttatgtgatgaccatggaagaggta
gctgaagcaattgatatgcatgagtctaccgttagcagagcaacaacctcaaaatatttg
caaactccccatggtatatttagtttgaaattgttttttaatagtggaatcaataatatt
tcttcggtcagtatcaaggcaattatcagtgaagagatagcaaaggaagataaaaactca
cccttaagtgatagtagtttagcagaaatattaatgacagaatattcacttgatatttca
agaagaactgttgctaaataccgcaaatcacttggcataccatgttcgagaaaaagaaag
aagaattttaaataa
DBGET
integrated database retrieval system
