Halanaerobium hydrogeniformans: Halsa_1256
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Entry
Halsa_1256 CDS
T01349
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
has
Halanaerobium hydrogeniformans
Brite
KEGG Orthology (KO) [BR:
has00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
has03016
]
Halsa_1256
Enzymes [BR:
has01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Halsa_1256
Transfer RNA biogenesis [BR:
has03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Halsa_1256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
BLYB
Motif
Other DBs
NCBI-ProteinID:
ADQ14684
UniProt:
E4RKH5
LinkDB
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Position
complement(1413660..1414988)
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AA seq
442 aa
AA seq
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MTKNKYYHIITYGCQMNEHDSEKLAGMLENIGYNNTNKLENADIVLLNTCTIRENAELKV
FGKLGQLKEYKRKNPDLIIGIGGCMMQLEEPVEEIYKKYRHVDLIFGTHNIHQVPELIKK
IEKNRERVVEVWDQEEGLIPDLPSQRESEHSAWISIIQGCDNFCTYCIVPYVRGRERSRP
LEAIIKEAEKLAAEGVKEVTLLGQNVNSYGNDLAEEIDFPLLLEELNKVDSLARIRFMTS
HPRDFSEKLLLAIKNLEKVAKHIHLPIQSGSNKILKEMNRGYSREYYIDTVKEIQNKMPE
AAISTDFIVGFPGESDEDFEQTLKLVKELRFDMAYTFIYSPRSGTPAAKREDQIAEEVKK
ERLNKLMDIQNRISYQKNQKLIGKIQKILVTGPSNRDENVYEGRTGTNKICFINKRPDLI
GKIVKVKIDSAKSWTLQGTVVE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaaataaatattatcatattataacatatggctgccagatgaatgaacatgat
tcagaaaaactggcaggtatgttagaaaatataggttataataatacaaataaattagaa
aatgctgatattgtattgcttaacacatgtacaattagagaaaatgctgaacttaaagtc
tttggtaaattgggtcagcttaaagaatataaaaggaaaaatccagatttaataataggt
attggtggctgtatgatgcagttagaagaaccggtagaagaaatttataaaaaataccgt
catgtagatctaatattcggaacccataacattcaccaggtacctgaattaataaagaaa
atagaaaaaaatagagaaagggttgttgaagtttgggatcaggaggaaggtttaattcct
gacctaccttctcagagagagtctgaacattctgcctggatatctattattcagggctgt
gataatttctgcacctattgtattgtgccttatgttagaggtagagagcgcagtcgacca
ctggaagctataataaaggaagcagaaaaattagctgccgagggagttaaagaagttact
cttttaggtcaaaatgtaaattcatatggtaatgatctggcagaagaaatagatttccct
ttacttttagaagaactaaacaaagtcgattctttagcaagaattaggtttatgacctct
catcccagagatttttctgaaaaattacttttggcaattaaaaatttagaaaaagtagct
aaacacattcatcttcctattcaatctggaagcaataagatcttaaaagagatgaataga
ggttatagcagagaatattatattgataccgtaaaagaaattcaaaataagatgccggaa
gcggctatttcaacagattttattgttggtttccctggagaaagtgatgaagactttgag
cagacattaaaacttgttaaagaactaagatttgatatggcctatacttttatctattct
cctcgcagtggaactccagctgctaaaagagaagatcaaatcgcagaagaagttaaaaaa
gaacgtctaaataaattaatggacattcaaaataggattagctatcaaaaaaatcaaaaa
ttaatcggtaaaattcaaaaaatactggtcacaggacccagcaatagagatgagaatgtt
tatgaaggtcgaactggaacaaataaaatttgttttataaacaaaaggcctgatttgatc
ggtaaaattgtaaaggtaaaaatagattcagcaaaaagctggactctacagggtactgta
gttgaataa
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