Halanaerobium hydrogeniformans: Halsa_1262
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Entry
Halsa_1262 CDS
T01349
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
has
Halanaerobium hydrogeniformans
Brite
KEGG Orthology (KO) [BR:
has00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
has03032
]
Halsa_1262
03400 DNA repair and recombination proteins [BR:
has03400
]
Halsa_1262
Enzymes [BR:
has01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Halsa_1262
DNA replication proteins [BR:
has03032
]
Prokaryotic type
DNA Topoisomerases
Halsa_1262
DNA repair and recombination proteins [BR:
has03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Halsa_1262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
TOPRIM_C
HATPase_c_3
6PF2K
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
ADQ14690
UniProt:
E4RKI1
LinkDB
All DBs
Position
complement(1421154..1423064)
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AA seq
636 aa
AA seq
DB search
METLFDKTDYNADQIQVLKGLEAVRKRPGMYIGSTGIKGLHHLVWEVVDNSIDEFLAGYG
DEIKVTIHENNEITVEDYGRGIPADIHKDSGLPAVQVVLTTLHAGGKFNNNSYKVSGGLH
GVGVSVVNALSEKLVLTTHWEGNKYRQVFKKGVPTSKLEKLGKTKRSGTVIRFKADSDIF
AARDYKFENLAHRLQESAYLNKDLTLILIDERGEGEKKKVFQYDGGIKAFVEFLNKDRNV
INEDIIYFESKPEDYEVEMAIQYNDGYNERIYSYANNINTIDGGYHLTGFKTALTRAINN
FAKNNNRLPAKISSLRGKDVREGITAIINVKLPEPQFEGQTKTKLGNSELRSIVESEVYE
YLSLYFDTNPDLANKVIDKAVQAVRARKASKKARELTKRKSALNSNALPGKLADCSSKKA
EKSELFIVEGDSAGGSAKQGRDRNFQAILPLKGKILNVERARLDKILNNTEIASIITALG
AGIGEDFNIKNLRYHKIIIMTDADVDGAHIATLILTLFYRYMPELIEEGYIYLAKPPLYK
VSRGKSTKYLYSDQELAEYKKKHENFSLQRYKGLGEMNPRQLWDTTMDPENRVLLRVEID
DDFEADDIFTRLMGSNASLRKEFIFNNAELVQTIDF
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactttttgataaaacagattataatgctgatcaaatacaggtattaaagggt
ctagaagcagttagaaaaaggcctggtatgtatatagggagtacaggaatcaaaggtcta
caccaccttgtgtgggaggtagttgataatagtatagatgagtttttagcaggttatgga
gatgaaatcaaagtaacaattcatgagaataatgagataactgttgaggattatgggaga
ggtattccagcagatatccataaagacagtggtctacctgcagttcaggttgttttaacc
accttacatgcaggaggtaaatttaataataacagttataaagtttctggtggtttacat
ggagtaggtgtttcagttgtaaatgcactttcagaaaaacttgttttaaccactcactgg
gaaggcaataaatatagacaggtttttaaaaaaggagttccaacttccaagcttgaaaaa
ctgggcaaaactaagcgtagtggtacagtgataagatttaaagccgatagtgatattttt
gcggcaagagattataagtttgagaatcttgcccatagattacaggaatctgcttattta
aataaagatttaactttaattttaattgatgaaagaggagaaggcgaaaagaaaaaagtc
ttccaatatgatggtggcattaaagcctttgttgaattcttaaataaagatagaaacgtt
attaatgaagatataatttattttgaatctaagccagaagattatgaagtagaaatggcc
atacaatacaacgatggttataatgagagaatttattcttatgcaaataatattaacaca
atagatggtggctatcatttaacaggttttaaaacagctctcacaagagcaattaataac
tttgcaaaaaataataatcgcttaccggcaaaaatttcttctttaagaggtaaagatgtt
agagagggtattactgctattatcaatgtaaaattaccagaacctcaatttgagggtcaa
accaaaaccaaacttggtaatagtgaacttagaagtatagtagaaagtgaagtatatgaa
tatctaagcctttattttgacaccaatcctgatctagcaaataaagttattgataaagct
gtacaggctgttagagctcgtaaagcatcaaaaaaagctagagaacttactaaaagaaag
agtgctttgaattcaaatgctctgccgggtaaattagcggattgcagcagcaaaaaagca
gaaaagagcgaactctttatagttgagggagattctgctggtggttctgcaaaacagggt
agagaccgtaattttcaggccattctgccacttaaaggtaaaattttaaatgttgaaagg
gcaaggcttgataagatattaaataatactgaaattgcttcaataatcactgctttagga
gcaggtattggagaagattttaatattaaaaatttacgctatcataaaattattattatg
accgatgctgatgtagatggtgctcatattgctactttaattttaactcttttttataga
tatatgccggagttaatagaggaaggctatatttatcttgctaaaccacccctttacaaa
gttagtagaggaaaatctacaaagtatttatacagtgatcaagaattagcagaatataag
aaaaaacatgaaaatttttcactgcagcgctacaaaggattgggagaaatgaatcctcgt
cagctgtgggatacaactatggatccagaaaacagggttttattacgagtagaaattgac
gatgattttgaagctgatgatatatttacccgtttaatgggttctaatgcttctttacgc
aaagaatttatttttaataatgcagaattagtccaaactatagatttttaa
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