Halanaerobium hydrogeniformans: Halsa_1323
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Entry
Halsa_1323 CDS
T01349
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
has
Halanaerobium hydrogeniformans
Pathway
has03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
has00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Halsa_1323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
has03019
]
Halsa_1323
03016 Transfer RNA biogenesis [BR:
has03016
]
Halsa_1323
Enzymes [BR:
has01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Halsa_1323
Messenger RNA biogenesis [BR:
has03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Halsa_1323
Transfer RNA biogenesis [BR:
has03016
]
Prokaryotic type
tRNA degradation factors
Halsa_1323
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
KH-I_KHDC4-BBP
OB_PDCD11
OB_RRP5_4th
S1_RRP5
SPATA25
Motif
Other DBs
NCBI-ProteinID:
ADQ14750
UniProt:
E4RKT0
LinkDB
All DBs
Position
complement(1490481..1492571)
Genome browser
AA seq
696 aa
AA seq
DB search
MKEWTLEYAGSDFHIETGKLAKQANGSVMVRSGDSQVLVTATMDEPRPGMNYFPLMVNYE
ERVYAIGKIPGGVLRREGRPRDEATLAARVIDRSIRPLFPDGYRKDVQVVATILSVDDDH
DPEMLALNGASIALTISDIPFDGPIGGVKVGLVDGEIIINPNEEERENSELDLVVAGSKD
AIMMVEASANEVEEAVILEAMDLAHQEIQKMIKIQKTIREEAGKEKEVFIEPTVDDELAE
KVEELLGDRLKEAIQIQKKQARGEKIASLKAELKENLNPDEDEDIDSQLNLAFENMIKKS
VKSLIIDDGIRPDGREHDEIRPIWAEVGVVPRSHGSGVFTRGETQALSVLTLGASSDEQI
LFGLGEKETKRYMHHYNFPSFCVGETSPMRSPGRREIGHGTLGEKALLPVIPEKDDFPYT
IRIVSEVLESNGSSSQASICGSTLSLMDAGVPIKAPVSGIAMGLMKKDDEIVVLSDIQGF
EDFHGDMDFKVAGTENGVTALQMDMKLKGLSKDVLEEALNKAKKGRMHIMEKMLEVIAEP
RPELSKNAPALISMKINPEKIRFVIGPGGKTINEIIDKTGAQIDIDDDGTVMILTDDQES
GKEAKKMVENLTKEVEVGEIYQGTVKRIMNFGAFVEILPNKEGLVHISKIADRHIKEVSD
VLSVGDEIPVKVIEIDNQDRINLSLKAAKKELEDKE
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaatggacacttgaatatgccggttctgattttcacatagaaacaggaaaatta
gcaaaacaggctaatggttctgtaatggttcgtagtggagattcacaagttcttgtaaca
gcaacaatggatgaaccaagacctgggatgaattattttcccttaatggtgaattatgaa
gaaagagtatatgctatcggtaaaattcctggtggtgttttaagaagagaaggaagacca
cgtgatgaagcaacccttgcagcaagagtaattgaccgttcaataagaccgctttttcca
gatggctatagaaaagatgtacaggtagttgctaccattttatctgttgatgatgatcat
gatccagaaatgctcgctctaaatggagcatcaattgctttaactatatctgatattcct
tttgatggaccaataggtggagtaaaggtaggtttagttgatggtgagataattataaat
ccaaatgaagaagaaagagaaaacagtgagcttgatctagttgtagctggttcaaaagat
gcaatcatgatggttgaagccagtgcaaatgaagttgaagaagctgttatcctggaagca
atggatttagcgcatcaagaaattcaaaaaatgatcaaaattcaaaaaacaattagagaa
gaagcaggtaaagaaaaagaagtatttatcgaaccaactgttgatgatgagcttgctgaa
aaagttgaagagcttctcggtgacagattaaaagaagcaattcaaattcaaaaaaagcag
gctagaggtgaaaaaatagctagtttaaaagctgagcttaaagaaaatttaaatcctgat
gaagatgaggatattgattctcaacttaacttagcttttgaaaacatgattaaaaaatca
gttaaaagtctaataattgatgatggtatccgtccagatggtagagaacatgatgaaatc
agaccaatttgggcagaagtaggagtagtacctcgttcacatggttcaggtgtatttaca
aggggagaaacccaggctttaagtgttttaacactcggtgcatccagtgatgaacagata
ttatttggcttgggcgaaaaagaaacaaaaagatatatgcaccattataatttcccatct
ttttgtgtaggtgaaacaagtccgatgcgttctccaggtaggagagaaattggtcatggt
acactgggtgagaaagctttacttccggttatccctgaaaaagacgattttccttatacg
atcagaattgtatcagaagttcttgaatcaaacggttcctcttctcaggccagtatctgt
ggaagcacactttctttaatggatgcaggagtacctataaaggcacctgtttctggtata
gcaatgggacttatgaaaaaagatgatgagattgttgttttatctgatatccagggtttt
gaagatttccatggtgatatggactttaaagttgcaggaaccgaaaatggtgtaacagct
ttacagatggatatgaaacttaaagggctttctaaagatgttttagaagaagctttaaat
aaagctaaaaaaggcagaatgcatataatggaaaaaatgctagaagtaattgctgaacca
agacctgaactttctaaaaatgctcctgctctgatcagcatgaaaattaatccagaaaaa
atacgttttgttattggacctggaggtaaaacaataaatgaaattatagataaaactggt
gctcaaatagatattgatgatgatggtactgttatgattttaacagatgaccaggaaagt
ggaaaagaagctaaaaaaatggtagagaaccttactaaagaagtggaagtaggagaaatt
tatcagggtacagttaaaaggatcatgaattttggtgcctttgttgaaatacttccaaat
aaagaaggtttagtccacatttctaaaattgctgacagacatattaaagaagttagtgat
gtattatctgttggagatgaaattccagttaaagttattgaaatagataatcaggatagg
attaatctatctctcaaagcagcaaaaaaagaactggaagataaggagtaa
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