Halanaerobium hydrogeniformans: Halsa_1326
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Entry
Halsa_1326 CDS
T01349
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
has
Halanaerobium hydrogeniformans
Brite
KEGG Orthology (KO) [BR:
has00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
has03016
]
Halsa_1326
Enzymes [BR:
has01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Halsa_1326
Transfer RNA biogenesis [BR:
has03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Halsa_1326
Prokaryotic type
Halsa_1326
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ADQ14753
UniProt:
E4RKT3
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All DBs
Position
complement(1494007..1494900)
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AA seq
297 aa
AA seq
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MFNGTANIIKPPGISSGYFIKILRKILDEKKAGHTGTLDPAAAGVLAVCFGKATKTIPFI
DDSKKSYICEMELGKETDSLDLDGKTIREDLNWNKLSEAKVKAEIMKFKGQGKQIPPMYS
AIHHQGKRLYKLARKGIRVEREAREIEIYSLDILDISLPIIRFKVTVSRGCYIRSLVRDI
GESLNSSAVMTFLLRTQSGPFKLENSVTIEELEEKGSRILLSPEQPLDLAKYTVKDSSFF
RIENGNYLLAKDFVEADIELELEEDFLCFSEEGKFLAIAKFTTKDDYQIYQPVKVFI
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgtttaatggtactgcaaatattataaaaccacctggaatatcttcaggttattttata
aagatattgcgtaaaatattggatgaaaaaaaagccggtcatactggcaccttagatcca
gctgcagctggagttttagctgtttgttttggtaaggcaactaaaactattccctttata
gatgacagcaaaaaaagttatatctgtgaaatggagctgggcaaagaaaccgatagtctt
gatcttgatggaaaaacaattcgtgaagatctaaactggaacaaactaagtgaagctaaa
gttaaagcagagattatgaaatttaaagggcaaggtaaacaaatcccccccatgtattct
gcaattcatcatcagggcaaacgtttatacaaactggctagaaagggaattagagttgaa
agagaagctcgagaaatagaaatatattctcttgacatacttgatatttctctgccgata
atcagatttaaagtaacggtttcaagaggttgttatatccgttctctggtcagagatatc
ggtgaatctctcaattcatctgcggttatgacttttcttttgagaacacaaagtggtcca
tttaagcttgaaaattctgttactattgaagaattagaagaaaaaggcagcagaatactt
ttaagtccagaacagccgctggatttagctaaatatactgttaaagactcttcatttttc
agaattgaaaatggtaattatttattggcaaaagatttcgtagaagctgatattgagcta
gaattagaagaagattttctctgtttttcagaggaaggaaaatttcttgctatcgcaaaa
tttacaactaaagatgattatcaaatatatcagccagttaaggtctttatataa
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