Halanaerobium hydrogeniformans: Halsa_1539
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Entry
Halsa_1539 CDS
T01349
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
has
Halanaerobium hydrogeniformans
Brite
KEGG Orthology (KO) [BR:
has00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
has03032
]
Halsa_1539
03036 Chromosome and associated proteins [BR:
has03036
]
Halsa_1539
03400 DNA repair and recombination proteins [BR:
has03400
]
Halsa_1539
DNA replication proteins [BR:
has03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Halsa_1539
Chromosome and associated proteins [BR:
has03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Halsa_1539
DNA repair and recombination proteins [BR:
has03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Halsa_1539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
VP7
DUF2240
SasG_E
DUF937
Motif
Other DBs
NCBI-ProteinID:
ADQ14964
UniProt:
E4RLQ0
LinkDB
All DBs
Position
complement(1722174..1722473)
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AA seq
99 aa
AA seq
DB search
MTKNELIDAVAENTGITKKDTGEVINNMIDTIMNHLRAEAKKPEDDRDNVQLIGFGTFEV
RDRSARKGRNPQTNEEIQIPARKVPVFRSGKSFKETVDI
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
gtgactaaaaatgaacttattgatgccgttgcagaaaatacaggtatcactaaaaaagat
actggagaagtaattaataacatgattgataccattatgaaccacctcagagcagaagct
aaaaaacctgaagatgatcgtgataatgtacaattaattggctttggtacttttgaagta
agagatagaagtgctagaaaaggccggaatcctcaaactaatgaggaaatacagatacca
gctcgtaaggtacctgtgtttagaagcggtaaatcttttaaagaaaccgtagatatctaa
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