Halanaerobium hydrogeniformans: Halsa_1581
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Entry
Halsa_1581 CDS
T01349
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
has
Halanaerobium hydrogeniformans
Pathway
has03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
has00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Halsa_1581
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
has03400
]
Halsa_1581
Enzymes [BR:
has01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Halsa_1581
DNA repair and recombination proteins [BR:
has03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Halsa_1581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
Zn_ribbon_PriA
Helicase_C
DEAD
HTH_11
DUF2321
HTH_17
Motif
Other DBs
NCBI-ProteinID:
ADQ15006
UniProt:
E4RLU2
LinkDB
All DBs
Position
complement(1761759..1763987)
Genome browser
AA seq
742 aa
AA seq
DB search
MGKIVKAIVDLPVRKLNKEFDYLIPAELENILEVGHLIKVPFSNRKVAAFVTEVDAEAEI
AHSKIKKVNDLIYSKPFFDKKMLSLFRWIAAYYHSYLIQVIKAALPPGITEKKVGRKKLK
YIKLKAEINDHQKILDKLDKRAPKQYQIYSYLLANKDKIITLKKAAEHAKTSKQTVYRLI
EKDLLELYDDYIDRIPEINQAKYPVEENTSKLIAEDHKLIENIFTSIVNSKADKFLLESS
FQKRKFIFLRKLIDKTIAEANDVIILVPEIEKDLVLIKKLKNYYQDKIALLHSQLSQGER
FDAWRRIQRSEVSIVVGARSAIFAPFNNLKLIIILEENNHSYKQQEHPLYHARQVAVRRQ
KENGAVLVLEAAFPSIESKYFAEQKKYKSLKLAKENDRQIKTQLVDLKKEVEAGNLSDLS
RELKDKILNNLENKQKTLLFLNRRGYGNYVICKKCGNVIKCDNCDISLHYHKADHKLSCH
YCGSQKYIPDNCPECGSSFVSPAGIGTENIVKQLKEIYQNAVIKRIDSDLKDNTEKIFKD
FKNDKIDILVGTQLIIKHDYYDNLNLLGVISADTALNSSDFRAAENTFQLLSELKSLLLK
EKESEFIIQSFNPEHFSISNAADSNYDNFYKKELELRNQRKYPPFCRLLNIIIQGAEEKS
VADKAIKISDFLDNWEIYYQDKMGAAPAAIKKIRNKFRWQIILKFNSFRNREYIIQLLEK
KFIENAGFNLEIRIDVDPYKML
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaatagtaaaagctatagtagatttaccggtaagaaaattgaataaagaattt
gattatttaattccagcagaattagaaaacatacttgaggtgggtcatttaataaaagtt
cctttttctaatcgtaaagttgctgcttttgtgacagaggttgatgctgaagcagaaata
gctcattcgaaaatcaaaaaagttaatgacttaatttattctaagccattttttgataaa
aaaatgttaagcttatttagatggatagctgcttattatcattcctatttgattcaggtt
ataaaagctgctctaccgcctggaattacagaaaaaaaggttggcagaaaaaagcttaaa
tatattaaactaaaagcagaaataaatgatcatcagaaaattttagataagcttgataaa
agagcacccaaacaataccagatttattcctatcttttagcaaataaagataaaattatt
actttaaaaaaagcagcagaacatgcaaaaacttcaaagcaaactgtatatcgtttaata
gaaaaagatttactggagttatatgatgattatatagatagaataccagaaataaatcaa
gctaaatatccagtagaggagaacactagtaaattaattgcagaagatcataaattaata
gaaaatattttcacttcgattgttaattcaaaagcagataaatttttattagaaagcagt
tttcaaaaacgtaaatttatatttttaagaaaattaatagataaaacaattgcagaagca
aatgatgttataattttagtcccagaaatagaaaaagatttagttttaataaaaaagctt
aaaaattactatcaggacaaaattgctcttctccacagccaactcagtcagggagaacgt
tttgatgcctggaggagaattcaaagatcagaggtctctattgtagttggggcaagatct
gcaatttttgctccttttaataatttgaagttgattataattctagaagaaaataatcac
agttataaacaacaggaacatcctctttatcatgcaaggcaggttgctgtaagaagacaa
aaagaaaatggagcagttttggtattagaagctgcttttccttcgatagaaagcaaatat
tttgccgagcaaaagaaatacaaatcattaaagcttgctaaagaaaatgatcggcaaata
aaaactcagttagttgatctcaaaaaagaggtagaagctggcaatttgagtgatttaagt
cgtgagcttaaagataaaatcctaaataatttagaaaataagcaaaaaacattgttattt
ttaaacagacgtggctatggaaattatgtaatatgtaaaaaatgcggaaatgttatcaaa
tgtgataattgtgatatttcacttcattatcataaagctgatcacaaattatcctgtcat
tattgtggaagccagaaatatatacctgataactgtcctgaatgcgggagttcttttgtt
tcaccagcaggaattggaaccgaaaatattgtaaaacagttaaaagaaatttaccaaaat
gctgttataaaaagaatagatagtgatttaaaagataatactgaaaaaatatttaaagat
tttaaaaatgataaaattgatatactggttggtacacagctgatcattaaacatgattat
tacgataatttaaatttactgggggttatttctgccgatacagctttaaatagttctgat
tttagagcagcagaaaatacttttcaacttttaagcgaattaaaatcattactgctaaaa
gaaaaagaaagtgaatttattattcagagttttaacccggaacattttagtattagtaat
gcagcagacagcaattatgataatttttataaaaaagaacttgaattaagaaatcaaaga
aaatatccacccttttgtcgactactgaatattataattcagggtgcagaggaaaaatct
gttgctgataaagctataaaaataagtgattttcttgataattgggaaatatattatcaa
gacaaaatgggagcagctccggctgctataaaaaagattagaaataaattccgctggcag
ataatattaaaattcaactcttttcgcaatagagaatatattattcagcttttagaaaaa
aagtttatagaaaatgctgggtttaacttagagatacgtattgatgtggatccatataaa
atgttataa
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