Halanaerobium hydrogeniformans: Halsa_1681
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Entry
Halsa_1681 CDS
T01349
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase [EC:
2.8.4.5
]
Organism
has
Halanaerobium hydrogeniformans
Brite
KEGG Orthology (KO) [BR:
has00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
has03016
]
Halsa_1681
Enzymes [BR:
has01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
Halsa_1681
Transfer RNA biogenesis [BR:
has03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
Halsa_1681
Prokaryotic type
Methylthiotransferases
Halsa_1681
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
B12-binding
Peptidase_M18
TRAM
Motif
Other DBs
NCBI-ProteinID:
ADQ15104
UniProt:
E4RIN4
LinkDB
All DBs
Position
complement(1876836..1878158)
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AA seq
440 aa
AA seq
DB search
MIKMNKKAAFYTLGCKVNQYETEAIIDIFLDNNFEIVDFSAEADVYIINSCTVTNQAASK
SRKIARRAKRSNNDSLVAVVGCYTQAFPEEVSSISEIDFIMGSSNKSKIVNKVKKLLAGK
NVDNEIKEYQELKDYEDLEIKRLSNTTRANIKIEDGCNQFCSYCIIPYARGPVRSREQKS
ILNEIKKMIGQGVKEIILTGTHLGAYGTDKGNKTALTDLMQQLTELNNLQRLRLSSIEGT
EIDAKMIDLIAENDIFCPHLHLPLQSGSNEILKAMQRPYTAEEFKETINKIRAKIPDIAI
TTDIIVGFPGENEKTFKQTLELVKELKFSKIHVFPFSAREGTPAFKMDNKLNGNIIKKFS
KKLRFINKSLMEEYQANFLGQNKKVLIEEARDQQTGFLTGYTDNYLKILVEGPDNLKNTL
REVKLEQSFDHSHIKGIIIE
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
gtgattaaaatgaataaaaaagcagctttttatactttaggctgtaaagtaaatcaatat
gaaactgaagcaataatagatatctttttagataataattttgaaattgtagatttttct
gctgaggcagatgtttatataattaatagttgtactgtaactaatcaggctgctagcaaa
agtagaaaaattgctagaagagcaaaaagaagcaataatgacagtttggtagctgttgtt
ggttgttatacacaggcatttccggaagaagttagttcgatttctgagattgattttata
atgggtagtagtaataagtctaaaatagttaataaggttaaaaaattactggctggtaaa
aatgtagataacgagataaaagaatatcaggaattaaaagattacgaagatttagaaata
aaaagattaagtaatacaaccagagctaatattaaaattgaagatggttgcaatcaattt
tgcagttattgtataattccttatgctagaggacctgtaagaagtagggaacaaaaatct
attttaaatgagattaaaaagatgatcggccagggagttaaagagattattttaactggc
actcatctcggggcatatgggactgacaagggtaataaaactgcattaactgacctgatg
cagcaattaactgaattaaataatcttcagaggctaagacttagttcaattgaaggtaca
gaaattgatgcgaaaatgattgatttaattgctgaaaatgatattttttgtccccacctt
catttacctcttcaaagcggaagtaatgaaattttaaaggcaatgcagagaccctatacg
gcagaggaatttaaagaaacgatcaataaaataagggctaaaatacctgatatagcaatt
acaaccgatattatcgttggttttccaggagaaaatgaaaagacttttaagcaaacatta
gagttagttaaagagcttaaattcagcaaaatacatgtttttccgttttcagcacgagaa
ggcactcctgcttttaagatggataacaagcttaatggaaatattatcaaaaaatttagc
aaaaaattgcggtttatcaataaatctttgatggaagaatatcaagcgaattttttaggt
caaaacaaaaaagttttaattgaagaagcaagagatcagcaaacaggatttttaaccggt
tatacagataattaccttaaaatactggtagaaggtccagataatctaaaaaacacttta
agagaagtgaaacttgagcagtcatttgatcattctcatattaaaggaataattatagaa
tag
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