Halanaerobium hydrogeniformans: Halsa_1836
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Entry
Halsa_1836 CDS
T01349
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
has
Halanaerobium hydrogeniformans
Pathway
has03420
Nucleotide excision repair
has03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
has00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Halsa_1836
03430 Mismatch repair
Halsa_1836
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
has03400
]
Halsa_1836
Enzymes [BR:
has01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Halsa_1836
DNA repair and recombination proteins [BR:
has03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Halsa_1836
MMR (mismatch excision repair)
Other MMR factors
Halsa_1836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
UvrD_C_2
CarD_TRCF_RID
ResIII
AAA_14
Motif
Other DBs
NCBI-ProteinID:
ADQ15254
UniProt:
E4RJ34
LinkDB
All DBs
Position
complement(2040033..2042180)
Genome browser
AA seq
715 aa
AA seq
DB search
MEDSDIIKDLNKEQKKAVQHDKGPLLLLAGAGSGKTRVLTRRIAYLIKQRGVSPYNILAV
TFTNKAAEEMKNRVAKMVDGVDKSLLISTFHSFCVRILRREAEKLGYQSNFVIFDSIDQR
KLIKKILKEENIDPKKTKPSSVLNKISNAKNELKSPEQFRNSAGSFYAKNIADLYEKYQK
QLKANNAVDFDDLIQLTVKLFKKYPKVLEHYQERFKYILVDEYQDINHAQYELVNLLAER
YRNVCVVGDPDQGIYGFRGADIRNILNFEDDYPDAKIIKLEQNYRSKANILKAAQAVIKN
NSSRKEKSLWTEKESGPEIELYEAESEKDEADFFCRMAKELKKSKDYSYDDMAVLYRTNS
QSRAFEDMLMKYGIPYQITGGVRFYERLEIKDIMAYLRLIYNPADDISFLRITNRPKRGI
GAGTLAKIQQYAETESISLYQAALQSKSNPDLSSSYQKRVLAFTKIIEELREQKDEIALA
RLTETLLEKSGYRKDLEEEKTNKAETRLENIEELFSVINDYMKNSNENTLAGFLEEVTLM
SDIDTLEEEQSAVTLMTIHSAKGLEFPVIFLVGLEEGIFPHANSLYERDGIEEERRLCYV
GMTRAMDRLFLSRAKIRLRFGERQINPPSQFLEEIPEELLIDPKKEKTDIAKEAKLVNDN
NSATEYVIGQKIVHPRWGIGIILSIRGKENTELKISFQQGKTRTLLAEFAPIQKV
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
gtggaagatagtgatataataaaagatttaaataaagaacaaaaaaaagcagttcaacat
gataaaggtcccctgcttttactggctggtgcaggtagtggaaaaacaagggttttaaca
aggagaatagcatatttaattaagcaaagaggagtatctccatataatattctggcagtt
acctttaccaataaagctgctgaagaaatgaaaaacagggtagcaaaaatggtagatggg
gttgataaaagccttttaattagtacttttcattctttttgtgtaagaattctaaggaga
gaagcagaaaaattaggttatcaaagcaattttgtaatttttgacagcatagatcagcgc
aaattaatcaaaaaaattcttaaagaagaaaacattgatcctaaaaaaacaaagccctct
tcagttttgaataaaattagtaatgcaaaaaacgagttgaaaagtcctgagcaattcaga
aattctgccggcagtttttatgcaaaaaatattgcagatctttatgagaaataccaaaaa
caattaaaggcaaataatgcagttgattttgatgatttaatccagctaacagttaagctt
ttcaaaaaatatccgaaggttttagagcattatcaggaacgctttaaatatattttggta
gatgaatatcaggatattaaccatgcccaatatgagctggtaaatttacttgctgagcgt
tatcgcaatgtttgtgttgttggtgatcctgatcagggtatttatggttttagaggagca
gatattagaaatatccttaattttgaagatgattatccagatgctaaaataattaaactt
gaacaaaattatcgttcaaaagcaaatattttaaaagcagcacaagctgtgattaaaaat
aacagttcccgcaaagaaaaaagcctttggacagaaaaagaatctggccctgaaattgaa
ttatatgaagctgaaagtgagaaagatgaggctgattttttctgcagaatggctaaagaa
ttaaagaaatctaaagattatagttatgatgatatggctgtattgtatagaactaattct
cagtctcgtgcttttgaagatatgttgatgaaatatgggattccttatcaaattactgga
ggggtaagattttacgaaagattggaaataaaagatattatggcatatctgcgcttaatt
tataaccctgctgacgatattagttttttaaggataacaaatcggccaaaaagaggaatt
ggagcaggtacactggctaaaattcagcaatatgcagaaaccgaatcaataagcttatat
caggcagcacttcagtccaaaagcaatcctgatttaagtagcagctatcaaaaacgtgta
ttagcttttacaaaaataattgaggaacttagagaacagaaagatgaaattgctttagcc
agattaactgaaacattacttgaaaagagtggttatagaaaagatcttgaagaagagaaa
actaataaggcagaaacaaggttagaaaatattgaagaacttttttccgttataaatgat
tacatgaaaaatagtaacgaaaatacgctggccggatttttagaagaagtaaccttaatg
tcagatatagatactctggaagaagaacaatctgcagttactttgatgactatccattct
gcaaaaggacttgaatttccagtcatatttttggtaggtttagaagaggggattttccct
catgccaattcgctttatgaaagagatgggatagaagaagaaagaaggctctgctatgtt
ggtatgacaagggctatggatagattatttttaagtagagctaaaataaggcttcgtttt
ggagaaagacagataaatccaccatctcaatttcttgaagaaattccagaagaattactg
attgatcccaaaaaagaaaaaactgacattgcaaaagaagcaaaattggttaatgataac
aactcagctacagaatatgtgatcggccaaaaaatcgttcatcctcgttggggaattgga
attatactctctattagaggcaaggaaaatacagagcttaaaatttcttttcaacaagga
aaaacaagaacacttttggcagaatttgctccaattcagaaggtttag
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