Halanaerobium hydrogeniformans: Halsa_1889
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Entry
Halsa_1889 CDS
T01349
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
has
Halanaerobium hydrogeniformans
Brite
KEGG Orthology (KO) [BR:
has00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
has03016
]
Halsa_1889
Enzymes [BR:
has01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Halsa_1889
Transfer RNA biogenesis [BR:
has03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Halsa_1889
Prokaryotic type
Halsa_1889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
AgI_II_C2
Pus10_C
DUF6616
TEP1_CUB2
Motif
Other DBs
NCBI-ProteinID:
ADQ15307
UniProt:
E4RJ87
LinkDB
All DBs
Position
complement(2095068..2095814)
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AA seq
248 aa
AA seq
DB search
MANNYKITLEYDGSNYSGWQRQKNTKETIQEKLENALSKINKNKVEVIGSGRTDAGVHAA
GQTANFFLDIQIPTYKIPIAINTHLPDDIICYKAEKVAKDFHARYDARGKKYRYRILNSN
FNSVFVRNYVYKVHQRLDLDIMQKGAKIFLGSHDFAAFCSAGSSVDSTIREIYSFDINSK
TNGEIQIDISGSGFLYNMVRILVGTLIELAKGKRNLADLEEILAGTQRERAGFTAPAKGL
TLLEVFYD
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
gtggctaataattacaaaataactttagaatatgatggcagtaattatagtggttggcag
agacaaaaaaatactaaagaaaccattcaagaaaagcttgaaaatgctttaagcaaaata
aataaaaacaaagttgaagtaataggttcaggaagaacagatgccggggttcatgcggct
ggtcagacggctaatttctttttggacattcaaataccaacttacaaaataccaattgct
attaatactcatttgccagatgacataatatgttataaagcagaaaaagtagctaaagat
tttcatgctcgttatgatgctcggggcaaaaaatatcgttatagaattttgaacagtaat
tttaattcagtttttgtccgtaattatgtttataaagttcatcagagattagaccttgat
attatgcaaaaaggtgcaaaaatatttttaggttctcatgattttgctgccttttgttca
gctggatcttcagttgattcaactataagagaaatttattcttttgatattaattcaaaa
acaaatggagaaattcagatagatatttctggaagtggttttttatataatatggttaga
atattagttggaactttaattgaacttgccaagggtaaaaggaatctggctgatttagaa
gaaattttggctggtactcaaagagaaagagctggttttactgctccagctaaaggatta
actttgctagaggttttttatgattaa
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