Halomonas sp. SH5A2: HXW73_01195
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Entry
HXW73_01195 CDS
T09591
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hash
Halomonas sp. SH5A2
Pathway
hash03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hash00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HXW73_01195
09124 Replication and repair
03420 Nucleotide excision repair
HXW73_01195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hash03021
]
HXW73_01195
03036 Chromosome and associated proteins [BR:
hash03036
]
HXW73_01195
03400 DNA repair and recombination proteins [BR:
hash03400
]
HXW73_01195
Enzymes [BR:
hash01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
HXW73_01195
Transcription machinery [BR:
hash03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
HXW73_01195
Chromosome and associated proteins [BR:
hash03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
HXW73_01195
DNA repair and recombination proteins [BR:
hash03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
HXW73_01195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
GlgS
Motif
Other DBs
NCBI-ProteinID:
QNI01668
UniProt:
A0A7G7Z4J7
LinkDB
All DBs
Position
241854..244178
Genome browser
AA seq
774 aa
AA seq
DB search
MRATYRVAVRALCDFTAREGDLDHRFTPAPSAQEGIQGHTLVASRRGADYIAELPLSGTF
EGLTVTGRADGFDPMANRLEEVKTHRGSLERMADNQRALHWAQVKVYGALLCAERGLEHV
TLTLVYLEIASGKETLLSQEASATELQAFFTAQCQRFLAWAEQEADHRQRRDSRLQTLRF
PHSTFRPGQRELAEDVYKATSTGRCLLAQAPTGIGKTVATLFPMLSAMPRQQLDRIAFLT
MKTPGRRLALDALAALRASQGEEAQPLRVLELVARDKACEYPDRACHGESCPLAAGFYDR
LPAARQAAVEQAWLDREALREVALAHDVCPYYLGQELARWTDVVVGDVNHWFDSHALLHG
LAQANDWRTGVLVDEAHNLVERARGMYSAELDQQRLNRVRRAAPPALSRPLNRLARQWQA
LFKDTSFKDTSLKDTGLDAVGEPGKPSYRLLSALPDKLVAAAQQVGASVTDHLGEHPEDA
SLELQELLFEALAFCRLAERFGEHSLCDLTRYGRGRAVLGLRNLIPADFLAPRFNAAHSV
VLFSATLTPGHYYRDLLGLPEKTVWREVASPFAARQLEVRIRRDISTRFRDRDASIEPIV
ATMAQQYQSRPGHYLAFFSSFAYLAAALARFRESHPEVPVFSQTRGMPEAQREAFLARFT
LGGKGIGFAVLGGVFAEGIDLPGDRLIGAFIATLGLPPFNDFNEALKARLGARFGQGDDY
TYRIPGMIKVVQAAGRVIRSPEDEGVVVLMDDRFAQANVSALFPSWWEVETMTQ
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgagggcgacctatcgggtagcggtgcgggcgctgtgcgatttcaccgcccgggaaggc
gatctcgaccaccgctttacccctgcgcccagtgctcaggaaggcatacaagggcatacg
ctggtggccagccgccgcggggcagactacatagccgaactgccgctgtcaggcaccttc
gaggggctgacggtgacggggcgggccgatggttttgaccccatggccaaccgtctggaa
gaagtcaaaacccaccgcggcagcctggaacgcatggccgataaccagcgcgcgctgcac
tgggcgcaggtgaaagtctacggcgcgctgctgtgtgccgagcgcggcctggagcacgtc
accttgacgctggtgtacctggagatcgccagcggtaaggaaaccttgcttagccaggaa
gcgtccgctaccgaattgcaggcgttttttaccgcccagtgccaacgctttctcgcctgg
gcggagcaggaggccgaccatcgccagcgccgcgacagccgcctacaaacgctacgtttt
cctcacagcacgtttcgtcccggccaacgcgagctcgctgaagacgtctataaagccacc
agtaccgggcgctgcctgcttgctcaggcgcccacgggcattggcaaaacggtggcgacg
ttgttccccatgctctcggccatgccgcgccagcaactcgaccgtatcgcctttctcacc
atgaagacccccggtcgccgtttggcgctggatgcgcttgccgccctgcgcgctagccag
ggcgaggaagcccagccgctgcgggtgctggaactggtggcccgcgacaaagcctgcgaa
taccctgaccgcgcctgccacggcgagtcgtgcccgttggcggcaggcttttacgaccgc
ctgccagccgcccggcaagcggcagtcgagcaagcctggctggatcgcgaggcgctgcgg
gaagtggcgctcgcccatgacgtgtgcccgtattacctgggccaggaactggcgcgctgg
acggacgtggtcgtcggcgacgttaaccactggttcgacagccacgcgctgctgcacggc
ctggcccaggccaacgactggcgaacgggcgtactggtcgatgaggcgcataacctggtg
gagcgcgcccgcggcatgtacagcgccgagctcgaccagcagcgccttaaccgggtgcgc
cgtgccgcgccgccagcgctttcacggcctttaaaccgtttagcccgccagtggcaggca
ttgtttaaagatacatcgtttaaagacacgtcgcttaaagatacggggctggatgcggta
ggcgaaccgggcaagccaagctaccggctgctctcggcgctgcccgacaagctggtggcc
gccgctcagcaggtgggggcttcggtgaccgatcacctgggtgagcaccctgaagacgcc
agtctagaactccaggaactgctgttcgaagcgctggcgttctgccgcctcgccgagcgt
tttggcgagcattcgctgtgcgaccttacccgctacgggcgggggcgggcggtgctggga
ctccgcaacctgattcccgctgattttctggccccgcgctttaacgccgcacactcggtg
gtgctgttctcggcaacgcttacgcctggtcactactatcgggaccttctcggcttgccg
gaaaagaccgtctggcgcgaagtagcatcgccgtttgccgcccgccagcttgaggtgcgc
atacggcgcgatatttccacccggtttcgtgatcgggatgcctccatcgagcccattgtc
gccaccatggcgcagcagtatcagagcaggccgggccactacctggcgttcttcagcagc
tttgcctacctggcggcggcgctggcgcggtttcgtgagtcgcacccggaggtgcccgtg
ttcagccaaacccgggggatgccggaggcgcagcgcgaggcgtttctggcgcgctttacc
ctcggtggaaaaggtatcggctttgcggtgctgggcggtgtcttcgcggagggcatcgac
ctgcccggcgaccggctaatcggcgcctttatcgccaccttggggttgccgccgtttaac
gacttcaatgaagcgctgaaagcgcgtttgggcgcgcgctttggccagggtgacgactat
acctatcgcatacccggcatgatcaaagtggtgcaggccgctggccgggtgattcgcagt
ccagaagatgaaggcgttgtggtattaatggatgatcgattcgcgcaagccaatgtaagt
gcgctattcccttcctggtgggaggtggagacgatgacccaataa
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