Halomonas sp. SH5A2: HXW73_01555
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Entry
HXW73_01555 CDS
T09591
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
hash
Halomonas sp. SH5A2
Pathway
hash03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hash00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HXW73_01555 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hash03019
]
HXW73_01555 (pcnB)
Enzymes [BR:
hash01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
HXW73_01555 (pcnB)
Messenger RNA biogenesis [BR:
hash03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HXW73_01555 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
QNI01733
UniProt:
A0A7G7Z4R2
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All DBs
Position
complement(314097..315482)
Genome browser
AA seq
461 aa
AA seq
DB search
MLKGFTRLLHSPGEQLKSLLEPQQGASGALSPRIIPRSEHPVSRQQISDAALKVLYRLNG
AGFEAYLVGGCIRDALLGKMPKDFDVATNATPEQVRDLFRNSRLIGRRFRIVHVRFGREV
IEVTTFRGKPQDEHGDHIAQQSDDGLLLRDNVWGSIEEDALRRDFTVNALYYNIADFTIH
DFANGAQDIEARTLRLIGDPATRYREDPVRMLRAVRFAAKLGFTIDADTEAPMYDLAPLL
LSIPPARLFDEALKLFMSGHGLVTFRLLSHYGLFGMLFPEAEEAMADAAWAEDLIEKALA
NTDKRIAEDRPVTPAFLLAAFLWAPVAHRQAALESEGMPSIPALQAAAQQVVTRQLQHIS
IPKRFGMPMRDIWELQGRLPLRRGKKAFQTREHPRFRAAYDLLLLREQAGEIPSGLGEWW
NAFQTGDEHDQRRLLQKVGGDPAGQGDRRRKRRRKPRKSEE
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaaggatttacccgtttattacacagtccgggagagcaattgaaatctctgctc
gaaccccaacagggcgcatcaggcgcgcttagcccccgcattatacctcgctccgagcac
cccgtttctcgtcagcagatcagtgatgctgccctgaaggtgctttatcgccttaatggc
gctgggtttgaggcctatctggtgggcggctgcattcgcgacgccttgcttggcaaaatg
cccaaggattttgacgttgctaccaacgcaacacccgagcaggtgcgcgatctatttcgc
aattcgcgcctgataggacgtcgttttcgtattgtgcatgtgcgctttggccgagaggtc
atcgaagtcacgaccttccgcggcaaaccgcaagatgagcacggcgaccatatcgcccag
caatccgacgacggcctactgttgcgggataacgtgtggggtagcatcgaagaagacgcc
ctgcggcgcgacttcaccgtgaatgcgctgtattacaacatcgccgacttcaccatccat
gattttgccaacggggcgcaggatatcgaggcgcggacgctgcgcttgattggagacccc
gccacgcgctatcgcgaggaccccgttcgcatgctgcgggccgtgcggtttgccgccaag
cttggctttacgatcgatgccgacaccgaagcgcccatgtacgatctggcgccgctgctg
ttgagcatccccccggcaaggctgttcgatgaagcgctcaagctattcatgtcgggtcac
ggactggtgaccttccggctgctgagccactatggcttgtttggcatgctgttccccgaa
gccgaagaagccatggcggatgcggcatgggcagaagatttaattgaaaaggcgcttgcc
aataccgataagcgtatcgccgaagaccgccccgttacacctgccttcttgctggcggcg
ttcttgtgggccccggttgcccaccgccaggcagcgcttgaaagcgaaggcatgccgtcc
attcccgccctacaagcggccgctcagcaggtagtgactcgacagctacagcacatctcg
atccccaaacgtttcggcatgccgatgcgcgatatttgggagcttcaggggcgcttaccc
ctgcgccggggtaaaaaagcgtttcagacccgcgagcacccgcgtttccgggccgcttat
gacctgctgctgctgcgcgaacaggcaggagaaatcccgagcgggctgggcgaatggtgg
aacgccttccagacaggcgacgagcacgatcaacgccggctgttgcaaaaagtgggcggc
gaccctgctggccagggcgaccgccgccgcaaacggcgacgcaaaccgcgtaaaagcgaa
gagtaa
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