Halomonas sp. SH5A2: HXW73_02250
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Entry
HXW73_02250 CDS
T09591
Name
(GenBank) DHH family phosphoesterase
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hash
Halomonas sp. SH5A2
Pathway
hash03410
Base excision repair
hash03430
Mismatch repair
hash03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hash00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HXW73_02250
03430 Mismatch repair
HXW73_02250
03440 Homologous recombination
HXW73_02250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hash03400
]
HXW73_02250
DNA repair and recombination proteins [BR:
hash03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HXW73_02250
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HXW73_02250
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HXW73_02250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
CIDE-N
Motif
Other DBs
NCBI-ProteinID:
QNI04675
UniProt:
A0A7G7ZD54
LinkDB
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Position
471439..473259
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AA seq
606 aa
AA seq
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MADVTDLPASQAPSPLQHASRPRLEPRPLDEAVYARAQAEGLNELQARLLASRLPGYQGE
LAPLVSPSLRYLAHPEKLADGRRAAERIAQAVAEGESIGILTDYDVDGITSHVVIRRTLV
ELFGVPEHKLHSLIGHRIHDGYGISLPLVERTLNLKPLPSLVITADCGSSDEPRIARLKA
AGIDVVVSDHHALPLEGPPPSAYACVNPTRDDCEYPDKTIAGCMVAWLLMSLARGVLIEW
GALSESTPKLSPWLSYVALGTVADCVSLGGSPANRAVVNQGLKLINRMEAACWRAMATRL
GADSVPFNAETLAFQMGPRINARSRLDDPYAALHFMLAETEGVANRQLEVLDQDNQSRKA
IEADMAEEARALAASALEANESAVVVLLEDGHPGVQGIVASRLVQAYGRPALVLTRAAAP
DMLTGSGRSIDGLHLRDALQRTYELAPEALPRFGGHSGAAGVGVPREQLEAFKVAFLKAV
DEQLAGQELYPRLWTDGELSTTQLSLATLGDIEVLGPYGREFDPPLFEGRFIVEALRPVG
AEGAHLMMELSMGPVTCKAIWFRALTPGELPAFGVGDTLHCAYKLNRNRWRGRETLQLMV
EHASAI
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgtgactgacctacctgccagccaggcgccgtcgccgctgcaacacgctagc
cgtccacggctggagcctcgtccactggacgaggcggtttatgcccgtgcccaggcggaa
ggcttgaatgagcttcaggcgcgcctgctcgcctcgcggctaccgggttatcaaggcgag
ctcgcgccgctggtatcgcccagcctgcgttatctggcgcacccggagaaactcgcggac
ggtcgccgggccgccgagcgcattgcccaggcggtggctgaaggcgaatcgatcgggatt
ctcaccgactacgacgtagatggcatcacctcccacgtggtgattcgccgtaccctggtc
gagctgtttggcgtgccggaacataagctgcacagtctgattggccaccgtatccatgac
ggctacgggatcagcctgccgctggtcgaacgcacgctgaacctgaagccgctaccatcg
ctggtcatcaccgccgactgcggcagtagcgacgagccgcgtattgcccgcttgaaagcc
gcgggcatcgatgtcgtggtcagcgaccaccatgcgttgccgctggaaggcccgccccct
tcggcctatgcctgcgtgaatccaacccgtgatgactgcgagtatcctgataaaaccatc
gccggatgcatggtggcgtggctattgatgtcgcttgcccgcggcgtgttgatcgagtgg
ggcgcgctgtcagaatccacccctaaactgtcgccctggctctcttacgtagcgctcggc
acggtcgcggattgcgtgtcgctgggcggcagccccgccaaccgtgcggtggtcaatcaa
ggtttaaaactgatcaaccgcatggaagccgcctgctggcgggccatggccacgcgattg
ggcgccgacagcgtaccgttcaatgccgaaacgctggccttccagatggggccgcgtatc
aatgctcgctcgcggctggacgacccttacgcggcgctgcattttatgctcgcggaaacc
gagggcgtggccaatcgccagcttgaggtgcttgaccaggataatcagtcgcgcaaggcc
atcgaggccgatatggcggaagaggctcgcgccctggccgcgtccgcgctggaagccaac
gagtcggcggtcgtcgttttactggaagatggccacccaggcgtgcagggcattgtcgct
tcaaggctggtgcaggcctatggccgcccggcgctggtgcttacccgggcggcggcccct
gatatgctcaccggttccggccgctcgatcgacggcttgcacctgcgcgatgcgcttcag
cgcacctatgaactcgcccctgaggcactgccacgttttggcggccatagtggggcggcc
ggggtgggtgttcccagagagcaattggaggcctttaaagtcgcttttctaaaggcagtg
gatgagcagttggcaggtcaagagctctatccgcgcctgtggaccgacggtgagctatcc
acaacacagctatcgctggcaacgcttggtgatatcgaggtcctgggcccctatggccgc
gagttcgacccgccgctgtttgaagggcgctttatcgtcgaagcgctgcgcccggtgggc
gcggaaggcgcgcatctgatgatggagctttccatgggccccgtgacctgcaaggccatc
tggttccgtgcactgacccccggtgagctgcccgcattcggcgtcggcgatacgctgcat
tgcgcctacaagcttaaccgcaaccgctggcgtgggcgtgagacgctgcagttgatggtt
gagcatgccagcgccatctag
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