Halomonas sp. SH5A2: HXW73_02825
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Entry
HXW73_02825 CDS
T09591
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hash
Halomonas sp. SH5A2
Pathway
hash03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hash00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HXW73_02825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hash03019
]
HXW73_02825
03400 DNA repair and recombination proteins [BR:
hash03400
]
HXW73_02825
Enzymes [BR:
hash01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HXW73_02825
Messenger RNA biogenesis [BR:
hash03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HXW73_02825
DNA repair and recombination proteins [BR:
hash03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HXW73_02825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
ResIII
AAA_22
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
QNI01952
UniProt:
A0A7G7Z5D1
LinkDB
All DBs
Position
592350..594350
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AA seq
666 aa
AA seq
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MPSTSPQQTLKDVFGFDDFRGGQQAVVSRVLDGHSTAAIFATGAGKSLCYQLPALHLPHL
TLVVSPLLALMQDQLSFLARHGVAAASIDSTQDRETTRDVMERAKSGELKILMISVERLK
NERFRHFLRQVRISLMVVDEAHCLSEWGHNFRPDYLKLPDYQHDFAIPQVLLLTATATPA
VIADMREKFAIAPDNVITTGFYRSNLELLVAPAMEDRQQQLIDWLKPQMLPGSEAPTIIY
VTLQQTAEQVAKALAAQGIAAQAYHAGLDSERRDAIQGQFMRGDSPCIVATIAFGMGIDK
GNIRNVVHYDLPKSIENYSQEIGRAGRDGLPSTCLTMAGRDGLRVLENFVYGDTPEYAGI
IRLLEEIAAAGGQPDRQWEVLLFTLSRDTNIRSLPLKTLLVRLEMHGIIAPRFAFLAEYR
LRYHIEPSELVGRFEGERAAFVRLIVDNIPIARTWGTVDFDRLHNAGQAQHIDASRARVI
TALEYFQDKGWLTLEGKRMTDVYEVLQPNFSIEALASQLFDECRHRERIEIERLQAMLAL
FESESCLTRRLAEHFGDSTFDAPPDTEQGRCGHCSVCYGHPVRLPDAPPLAALSDADFVR
YATPLIERHAHQFGQPPNAQRLAHFLCGLTMPVFTPLKARSLDGFAVFEQRAYPEVREWL
AGYLEC
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcacatcgccgcagcaaacgctcaaagacgtcttcggctttgacgactttcgc
ggcggccagcaggcggtggtgtcaagggtgctggacgggcactctacggcggcgattttt
gccactggcgcgggaaaatcgctctgctaccagctcccggcgcttcatttgcctcacttg
accctggtcgtgtcgccgctgctggcgctaatgcaggatcagctttcctttctggcccgc
catggtgtggccgccgcgagtatagattccacccaagaccgtgaaaccacccgtgatgtc
atggaacgcgccaaaagcggcgaacttaaaatcctcatgatctcggtggagcggctcaag
aacgagcgctttcgccactttctacgccaggtgcgtatttcgctaatggtcgtcgatgaa
gcccactgcctttccgagtgggggcataactttcgcccggattacctcaaactgccggac
tatcagcacgacttcgctattccccaggtgctgttgctcaccgccacggcaacgcccgct
gttatcgccgatatgcgtgagaagtttgctatcgcgccggataacgtcattaccaccggc
ttttaccgttccaatcttgaactgttggtggcgcctgccatggaagatcgccagcagcag
ttgattgactggctgaagccacagatgctgccgggcagcgaagcaccgacgattatctat
gtcaccttgcagcaaaccgccgagcaggtggcgaaagcgctggcggctcagggcattgcc
gcccaggcgtatcacgccgggctggattctgagcggcgagatgcgattcagggccagttc
atgcgcggtgattcgccctgcatcgtggccaccattgcgttcggtatgggcatcgacaag
ggcaatattcgcaacgtggtgcactacgacctgcccaagtccatcgagaattacagtcag
gagattggccgggcggggcgtgatggcttgccttccacctgcctgaccatggcggggcgc
gatggcttacgggtgctggaaaactttgtttacggtgatacccccgaatacgctggcatt
atccgcttgctggaagaaatcgcggcagcaggcggccagccggatcgccaatgggaagtc
ctgcttttcacgctttcccgcgacaccaatatccgttcgctgccattgaaaacactacta
gtgcggttggaaatgcacggcattattgcgccgcgctttgcgtttctggccgagtatcgg
ctgcgctaccatatcgaaccctctgaattggtaggccgctttgaaggtgagcgggcggcc
tttgtgcgccttattgtcgataatattcccatcgcccgtacctggggcacggtagatttt
gatcggctacataatgccgggcaggcgcaacacatcgatgcctcccgcgcccgtgtgatt
accgcgcttgagtactttcaggataaaggctggctgaccctggaaggcaagcggatgacc
gacgtgtacgaggtgcttcagccgaatttttccattgaagcgctggcgagccagttattt
gacgaatgccgacatcgggaacggattgagattgagcggctacaggccatgctggcgctg
tttgaatcggaaagttgcctgacgcggcggctggccgagcactttggcgatagcactttt
gatgcgccacctgacaccgagcagggccgctgcgggcactgctcggtgtgttacggccat
cccgtacgactgccggatgcgccgccgctggccgcgctaagcgatgctgattttgtgcgc
tatgccacgccgctgatcgagcgccacgcgcaccaatttggccagccgcccaatgcgcag
cggctggcgcattttctgtgcggcctcaccatgccggtcttcaccccgctcaaagcgcgt
agccttgacggcttcgcggtctttgagcagcgcgcctaccctgaggtacgtgaatggtta
gcgggttatttagaatgctaa
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