Halomonas sp. SH5A2: HXW73_08085
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Entry
HXW73_08085 CDS
T09591
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hash
Halomonas sp. SH5A2
Pathway
hash03030
DNA replication
hash03430
Mismatch repair
hash03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hash00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HXW73_08085
03430 Mismatch repair
HXW73_08085
03440 Homologous recombination
HXW73_08085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hash03032
]
HXW73_08085
03400 DNA repair and recombination proteins [BR:
hash03400
]
HXW73_08085
Enzymes [BR:
hash01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HXW73_08085
DNA replication proteins [BR:
hash03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HXW73_08085
DNA repair and recombination proteins [BR:
hash03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HXW73_08085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
PAS_4
PAS
MASE1
Rv2179c-like
PAS_8
Motif
Other DBs
NCBI-ProteinID:
QNI02895
LinkDB
All DBs
Position
complement(1745353..1747413)
Genome browser
AA seq
686 aa
AA seq
DB search
MTKGGLPKRQRLIGLWLLLSGISLLGGAVFAAWLDAQLAPSGATRVALWLGSFSGGVTIF
LAGLLLERMLFTPLRHLQVQLARLVANPDARDEYPPEGWLKGLGPDLHRVRESWRDDRSR
LATAHTEGARSAAKIRQELETLLQVLETPLLLCDHHRRVMLFNQAAEDFFADNTGLGLGK
RLEALLPVASLQQAISQLPNDGAPRELLSPCDDRWLKVILRRVPGSDGETLLTFSDATAS
WSSEMGVRAELADMLTPLRQHTASLTSAADALIQLRHQGDLETSSLRQRLEHVIQEEGAT
LGDNVAKIGQLLDDMQHQGERLTPMWSNDFWQALDERLDPEHRLITPVGMPAWFKGDAPA
LIALFDSLCKHLNAHLPDSGFEGEMCLGNKRVYLDLIWHGKALPEHALAEWRQQPLPSLP
LSPNVADVLRQHASDIWSLADDNGIHARLRLPLPAMDRVGAPRETAPPRPEFHDFGIADL
PPPDEALASRSLRSLDVVAFDTETTGLELRRGDTVISLGACRVVNARLLASDVFDQKVDP
KRPIPLASTAIHGLTDADVAGAPPLDIVLSRFRDYVGEAVLLAHNAAFDLLAISHHGVTF
DLPVIDTLLISRALDEALDGHDLDSLAQRYDLAFPPGTRHTALGDARVTAELWLALLPRL
EARGINTLEQLLALQANAFDRQDASA
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaggcggactgcccaaacgccagcggttgattggcctatggcttctgcttagc
ggtatcagcctgctgggcggggctgtctttgctgcctggctggatgctcaattggccccg
agcggggcgacgcgagtcgccttatggctgggcagtttttccggcggcgtgacgattttc
ctggcgggattgctgcttgaacgcatgctgtttaccccactgcgccacctgcaggttcag
ttggcgcgcctggtggcaaaccctgatgcacgcgatgaatacccgcccgaaggctggctg
aaaggcttggggccagacctgcaccgggttcgcgagagctggcgagacgatcgtagccgc
ctggccacggcgcatacagaaggggcgcgcagcgccgccaaaattcgccaggaacttgaa
accctgctgcaggtgctcgaaacccctctcctgctgtgtgaccatcaccgccgtgtgatg
ctgttcaaccaggcagctgaagacttcttcgccgacaataccggccttggcctgggcaaa
cgcctggaggcgctcctgccggttgctagcttgcagcaagcgatcagccagctacccaat
gacggcgcgccgcgtgaactcctttctccctgtgacgatcgctggctgaaagtcattttg
cgccgcgttccgggcagcgacggcgaaacgctgttgacgttcagtgacgcgacagcctcc
tggtcgagcgaaatgggggtacgtgcggagcttgctgacatgttgacaccccttcgccag
cataccgcgagcctgaccagtgccgctgacgcgctgatccagttgcgtcatcaaggggat
ctggaaacctcatcactgcgccagcggcttgaacacgtcatccaggaggaaggcgctacg
cttggcgacaatgtcgctaaaatcggtcagttgctcgatgatatgcagcaccagggcgaa
cgcctgacgcccatgtggtccaacgatttctggcaagccctggacgaacgcctcgatcca
gaacaccgcctgattacccccgtcggcatgccagcctggttcaagggcgacgcaccggcc
ctgattgccctgttcgactcactctgcaaacacctcaacgcgcacctgcccgacagcggc
tttgagggcgaaatgtgcctgggtaataagcgtgtctatctagaccttatctggcacggc
aaggcgttgcccgagcatgcgctggccgaatggcggcagcaaccgttgccgtcactgccg
ctaagccccaacgttgccgatgtgctgcgccagcatgccagcgatatctggagcctggcg
gacgacaatggcatccacgcccgcctacgccttccgctacccgccatggatcgcgtgggc
gccccgcgggaaaccgccccgccgcgcccggaattccatgactttggcattgccgacctt
ccgccgccggatgaagccctcgccagccgctcgctgcgcagcctggatgtggtggcgttt
gataccgaaaccaccgggcttgagctgcgccgcggcgataccgtgattagcctgggcgcc
tgtcgcgtggttaatgcgcggctgttggcaagtgacgtcttcgatcaaaaagtcgacccc
aagcggcctatcccgctggccagtaccgccattcatgggcttaccgatgcagatgtggcg
ggcgcgccgccattggatatcgtgcttagccgttttcgtgactatgtcggcgaagcggtg
ctgctggcccataacgccgcctttgacttacttgccatcagccatcacggcgtcaccttt
gatcttcccgtgatcgataccctgcttatctcacgcgcgctagacgaagcgctggatggg
cacgacctcgatagccttgcccagcgatacgacctggccttcccgcccggcacacgccac
acggcgctgggcgatgcccgggtcaccgccgaactctggctcgcgctactaccgcgcctg
gaagcccgcggcatcaataccctggagcagctgctcgctcttcaggccaatgccttcgac
cgacaggatgccagcgcctaa
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