Halomonas sp. SH5A2: HXW73_09180
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Entry
HXW73_09180 CDS
T09591
Name
(GenBank) transglycosylase SLT domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
hash
Halomonas sp. SH5A2
Brite
KEGG Orthology (KO) [BR:
hash00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hash01011
]
HXW73_09180
Enzymes [BR:
hash01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HXW73_09180
Peptidoglycan biosynthesis and degradation proteins [BR:
hash01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HXW73_09180
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Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM3_LYK4_5
LysM1_NFP_LYK
SLT_2
LysM_RLK
NMB0315_dom_I
Motif
Other DBs
NCBI-ProteinID:
QNI03085
LinkDB
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Position
1966606..1967820
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AA seq
404 aa
AA seq
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MTYRTIRQRLLLGAGSTVIMSLLLAAAANSQASANQYDPSPRSAFNTSDASASSHSTVTH
VHFWEELMLEPQDAWSKLRESFHWREQSLSADAQARVDEWIDHYRSSPENIVEITGRASP
WLAWITQQISDRNLPGELALIPFVESSFDPSARSHRGAAGLWQFMPGTGDALGLVRNGNY
DGRLDVVTSTNAALDYLEMQADQWYEGDLQLSLAAYNAGAGTVNKAKQRAESQGLRGKYW
DLSLPQETMQYLPKLLAIATIIDDPERYNISLPDIHTEPAFAKVKLEHSVTLSEASKLLR
VDKSALAELNPGLLNGALNPSSAQTLLVPEDVNHDVLAELSNGANQRQTIANADTPDTYR
VESGDSLSAIANRYNLSAQELMRLNEIERPEALQAGQLLTLSER
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgacttatcgcacgattcgccaacgccttttattgggcgccggcagcaccgtgatcatg
agcctgttactggcggctgccgctaactctcaggcgtcagccaaccaatacgatccttct
ccgcgatcagccttcaacacatctgacgcctcggcgtcctctcactccacagttacccat
gtacatttctgggaagaactgatgctggaaccgcaggacgcctggagcaaactgcgcgaa
agcttccactggcgtgagcagtcgctgtctgccgacgcacaggcacgtgtcgatgaatgg
atagatcactaccgttcgagccctgaaaatattgttgaaatcaccggacgtgcaagtcca
tggcttgcctggatcactcagcaaataagtgatcgcaacctgccgggagaattagcgctt
attcctttcgttgaaagctcttttgatcccagcgcgcgaagtcatcgaggcgctgcgggg
ctgtggcaattcatgcctggcaccggtgacgctttagggcttgtacgcaacggtaattac
gacggcaggctcgatgttgtcacctcgactaacgccgcgctggactacctcgaaatgcag
gccgaccagtggtacgagggtgatctgcagctttctcttgccgcctacaatgcgggcgcc
gggacagtcaataaagccaaacaacgcgccgaaagccaaggcttgcgaggcaaatattgg
gacctgagcctgccccaggaaaccatgcagtacctgcccaagttacttgctattgccacg
attatcgatgacccggaacgctacaacatcagtttgccggacatccatacagagccggcc
ttcgccaaggtaaagcttgagcattcggtcaccctgtctgaagcgtcaaagttgcttcgg
gtagataaatcggcattggctgaactcaatcccggtctcctcaatggtgcgctcaacccg
tcaagtgctcaaacgctgctagtacctgaagacgtgaatcatgacgttctcgcagagcta
tcaaacggtgccaatcagcgtcagaccattgccaacgccgatacgcccgatacttaccgc
gttgaaagtggcgatagcctctcagcgatcgcgaatcgctataatctgagcgctcaagag
ttgatgcgtttaaatgagattgaacgtccagaagctttacaagcaggtcaactcctgaca
ctttcagaacgttga
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