KEGG   Halomonas sp. SH5A2: HXW73_09545
Entry
HXW73_09545       CDS       T09591                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
hash  Halomonas sp. SH5A2
Pathway
hash03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hash00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HXW73_09545
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hash03019]
    HXW73_09545
Enzymes [BR:hash01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     HXW73_09545
Messenger RNA biogenesis [BR:hash03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     HXW73_09545
SSDB
Motif
Pfam: DEAD Helicase_C AAA_19 ResIII P-loop_SecA AAA_30 Gag_p24 UTP25_NTPase-like Sacchrp_dh_NADP Shikimate_DH UvrD_C HI1480 Flavi_DEAD
Other DBs
NCBI-ProteinID: QNI03150
LinkDB
Position
2049006..2050259
AA seq 417 aa
MNFSDLGLDADLLRAVTDQGYREPTPIQRQAIPVVLQGRDLLASAQTGTGKTAGFTLPML
QRLSAGKPATKRQVRALVLTPTRELAAQVGESVTTYGQHLSLRSHIIFGGVGQQPQVDAL
KRGLDILVATPGRLLDLQQQGHVDLSSVEIVVLDEADRMLDMGFIHDIKRLLKLVPSKRQ
NLLFSATFSNEIQTLAQQFLNDPAFIDVAPRNTTADKIAQSVYQVDREKKRELLAHLIKQ
HQWYQVLVFTRTKHGANRLAEQLSKQDIPAMAIHGNKSQGARTRALGAFKSGELQVLVAT
DIAARGLDINELPHVVNFELPNVAEDYVHRIGRTGRAGSEGEAISLVCVDEHALLRGIER
LIKQTLTKHIEPGFEPDPNATPQPIENGRRQPRNARSQRKPSQHSDRDAAPKRRARR
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgaacttttctgacctcggcctcgacgccgacctactgcgcgccgtcaccgaccaaggg
tatcgcgagccgacccccattcaacgtcaagcaattcccgtcgtgttgcaaggccgcgat
ttgcttgccagtgctcaaacgggaacgggcaaaaccgccggttttacgctccccatgctg
cagcgtctatcggcaggcaaacccgccaccaaacgccaggtgcgcgcgctggtattaact
ccgacccgggaactggccgcccaggtaggcgaaagcgttaccacttacggacaacatctc
tccctgcgttcgcatattatttttggtggcgtgggccagcagccccaggtcgacgcattg
aaacgcggcctggatatcctggtggcgacgccggggcgtttgctcgacctgcaacaacag
gggcacgttgacctgtcaagcgtcgagattgtcgttctggatgaagccgaccgcatgctc
gacatgggctttatccacgacattaaacgccttttgaaactggtccctagcaagcgccag
aacctgctgttttccgccaccttctccaacgagattcaaaccctggcgcaacagtttttg
aacgaccctgcgtttatcgacgtcgctccgcgtaataccacggcagacaaaatcgcccag
tcagtttaccaagtagatcgggagaaaaaacgcgagctgctggcacacctcatcaagcaa
caccaatggtatcaagtgctggttttcacccgcaccaagcacggcgccaaccgcctggca
gaacagttatccaagcaggatatccctgccatggccattcatggcaacaagagtcagggc
gctcgaacacgtgcgcttggagcgtttaaaagcggcgaattgcaggtattggttgccacc
gatattgccgcacgcgggctggatatcaacgagctgccccatgtagtcaactttgagctg
cccaacgttgcggaagattatgtccaccgtatcgggcgcactggccgggctggcagtgag
ggcgaggcgatttcactggtctgtgtcgatgaacatgccctgttacgcggcattgaacgg
ctgataaaacagaccctgactaaacacatcgagcccggttttgaacccgacccgaatgcc
accccacagcctatcgagaatggtcgtcggcaaccgcgcaatgcgcgcagtcaacgcaaa
cccagccagcatagtgaccgcgatgcagcgcccaagcgtcgtgctcgccgctag

DBGET integrated database retrieval system