Halomonas sp. SH5A2: HXW73_10140
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Entry
HXW73_10140 CDS
T09591
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hash
Halomonas sp. SH5A2
Brite
KEGG Orthology (KO) [BR:
hash00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hash03032
]
HXW73_10140 (topA)
03400 DNA repair and recombination proteins [BR:
hash03400
]
HXW73_10140 (topA)
Enzymes [BR:
hash01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HXW73_10140 (topA)
DNA replication proteins [BR:
hash03032
]
Prokaryotic type
DNA Topoisomerases
HXW73_10140 (topA)
DNA repair and recombination proteins [BR:
hash03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HXW73_10140 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
CEP104_ZnF
Motif
Other DBs
NCBI-ProteinID:
QNI03259
UniProt:
A0A7G7Z938
LinkDB
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Position
complement(2166554..2169184)
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AA seq
876 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGNDFIVKSSVGHIRDLPTSGSGKAASDPKERARQAATTR
KMSADEKAEYKKVKAQDQLIRRMGIDPNNGWKAHYEVLPGKEKVVAELKKLAEKADAVYL
ATDLDREGEAIAWHLRETIGGDDSRYKRVVFNEITKNAIQDAFKAPGALNIPRVEAQQAR
RFLDRVVGFMLSPLLWAKIARGLSAGRVQSVAVRLIVEREREIRAFIPEEFWDVHADFAS
PDGEQVRFALARQDGKAFRPTSEKDTLARIERLRNASLSITSREDKPTSSKPTAPFITST
LQQAASGRLGFSVKKTMTMAQRLYEAGYITYMRTDSTNLSKDAVDNVRTFIGEEYGPRYL
PEAANRYTSKESAQEAHEAIRPSSVDRQATDLVGMERDAERLYELIWRQFVACQMTPAEY
LSSTLSIDVDGYELRAKGRVLKFDGYTRVMKPSGKNEDQRLPDLPVGTPMSLEALDPQQH
FTKPPARYTEASLVKELEKQGIGRPSTYASIISTIQDRGYVKLESRRFYAEKLGDIVTER
LKESFPDLMDFSFTARMEDSLDEVAEGERNWQALLDAFYEEFREELVQAESEEGMRPNQP
VPTDIDCPACGRQMQIRTASTGVFLGCSGYNLPPKERCKTTIDLIPGEEAVAADAGEEAE
TDALRAKRRCPICSTAMDNYLIDETRKLHICGNSPDCEGYEVETGKFKIKGYDGPLIECD
KCGADMQLKSGRFGKYFGCTNSECKNTRKLLKSGEVAPPKMDPIDMPELACQKVDDHYVL
RDGASGLFLAASKFPKNRETRPPLVKELKAHADELPEKYHFILKAPSEDPDGRPAQIRYS
RKFKEQYVMTDEDGKATGWKATFEGGKWHVEDKRKK
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagtcactggtcatcgtcgagtcgcccgccaaagcgaagacgatcaataaatat
ctcggcaacgatttcatcgtaaagtcgagcgtgggtcacatccgtgacctgccgaccagc
ggctcaggtaaggcagcctctgatcccaaggagcgcgctcgccaggccgcgactacacgc
aaaatgtcggcggacgagaaagccgaatataaaaaggtcaaggcgcaggaccaactgata
cggcggatgggcattgaccccaataacggctggaaagcccattacgaagtacttcccggc
aaggaaaaagtcgttgccgaactcaaaaaattggccgaaaaggccgatgccgtttatctg
gcaacggatttggaccgcgagggggaagccattgcctggcacctgcgcgaaaccatcggc
ggggacgacagccgctacaagcgcgtggtgttcaacgagatcaccaaaaacgccattcag
gacgcttttaaagcccctggggcgctgaatattccgcgtgttgaagcccagcaggccagg
cgttttctcgatcgtgtggtgggtttcatgctgtcgccgttgctttgggccaagattgcc
cggggcctatcggctgggcgcgtgcagtccgttgccgtgcgcttgattgtcgagcgtgag
cgggaaatacgcgcctttattcccgaagagttctgggatgtgcacgctgactttgcctca
ccggatggtgagcaagtgcgcttcgcgctggcccgtcaagatggcaaggccttccgccca
acgtctgaaaaggacaccctggcgcgtatcgagcggctcaggaatgcatcgctttcgatc
acctcgcgggaagataagcccactagctccaagccgacagcgccttttatcacctcgaca
ctgcaacaggcggctagcgggcggttagggttttcggtcaaaaagaccatgaccatggct
cagcgcctctacgaggcgggctatatcacctacatgcgtactgattcgaccaatctttcg
aaagatgcggtggacaacgtgcgcacctttatcggtgaagagtacgggccgcgttattta
cccgaggcagccaaccgatataccagtaaggaaagcgcccaagaggctcacgaagccatt
cgtccgtcgagcgttgaccgtcaggcgaccgacctggtgggcatggagcgtgatgccgag
cgcctttacgagcttatctggcgtcagtttgtggcctgtcagatgacgcccgccgagtat
ctttccagcacgctgagtatcgacgttgacggctatgagctgcgtgccaaaggtcgtgtg
ctcaagttcgacggttatactcgcgtaatgaaacccagcggtaagaatgaagaccagcgc
ttgccggacctgcctgtcggcacgcccatgtcgcttgaagcccttgacccgcagcagcat
tttaccaagccgcctgcgcgttacaccgaggcgagcctggtcaaggagcttgaaaagcag
ggtatcgggcgtccatcgacctacgcctcgattatctcgacgatccaggatcgtggctac
gtaaagctcgagagccgccggttctatgccgaaaaactcggcgatatcgtgacggaacgt
ctaaaggagtccttccctgatttgatggacttttcgtttaccgcccgtatggaagacagc
ctggacgaagtggccgaaggtgagcgtaactggcaggcgctgctggatgccttctacgaa
gaattccgcgaggaactggtccaggctgaaagcgaagaaggtatgcggcccaaccaaccg
gtgcccaccgatatcgactgccccgcctgcggtcgccaaatgcagattcgtacagcctcg
acgggggtttttctcggctgcagcggctataacctgccgcccaaggaacgctgcaaaacc
acgatcgacctgatacccggcgaagaggcagtggccgccgacgcgggtgaagaagctgaa
accgacgcgctgcgcgccaagcgtcgctgtccaatctgcagcacggcgatggataactat
ctgatcgatgagacccgtaagctgcatatctgtggcaacagcccggattgcgaagggtat
gaggttgaaaccggcaagttcaaaattaaaggctatgacgggccgcttatcgaatgcgat
aagtgcggtgcggacatgcagctgaagtcagggcgctttggcaagtactttggttgtacc
aacagcgaatgtaaaaatacccgcaagctgttgaagagcggcgaagtggcaccgccgaag
atggaccccatcgatatgccggaactggcctgccagaaagtcgatgatcactacgtactg
cgcgacggtgccagcgggctgtttctggcagcgagcaagtttcccaaaaaccgtgaaacg
cgcccgccactcgtcaaagagctcaaggcccatgccgatgagttgcctgagaagtaccat
tttatcctcaaggcgcccagcgaagacccggacggacgtcccgcgcagattcgttactcg
cgcaagttcaaagagcagtacgtgatgaccgacgaggatggcaaggccacaggctggaaa
gcaacctttgaaggcggcaaatggcacgtggaggataagcgcaaaaaatga
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