Halomonas sp. SH5A2: HXW73_12670
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Entry
HXW73_12670 CDS
T09591
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
hash
Halomonas sp. SH5A2
Pathway
hash03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hash00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HXW73_12670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hash03019
]
HXW73_12670
03009 Ribosome biogenesis [BR:
hash03009
]
HXW73_12670
Enzymes [BR:
hash01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
HXW73_12670
Messenger RNA biogenesis [BR:
hash03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HXW73_12670
Ribosome biogenesis [BR:
hash03009
]
Prokaryotic type
rRNA helicases
HXW73_12670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QNI03714
UniProt:
A0A7G7ZAE3
LinkDB
All DBs
Position
complement(2697790..2699502)
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AA seq
570 aa
AA seq
DB search
MTSTSVASPTFGDLALLPAVLTAVESQGYVTPSPIQAQTIPALLEGRDMLGQAQTGTGKT
AAFALPLLSRLELTRREPQVLVMAPTRELAQQVAVSFSKYGQNLKGLEVATLCGGQEYRE
QLGALKRGAQVVVGTPGRIIDHLDRGSLKLDGLSALVLDEADEMLRMGFIDDVKRVVADT
PKDARRVFFSATLPTEIERIVNRYLVDPVKVAIEKGTTTGENIEQRIVRVDGGAKLEALA
RILEVEPVDGAIVFVRTRAACTTLVEQLTARGVNAAGLSGDLDQSLRERTITRLKRGKVD
VLIATDVAARGLDVSRITHVINYDLPQDAEAYTHRIGRTGRAGRSGIAITFAGFREGRKV
GWMEQATGQKMADMPLPDESAIRAHRDEVFHQRVVASLTKGADEQRALIERLVEEGHDPV
ELACAFSAMARADEAPIGRLQAPRKEKPSRDGASGGKPGARRERSSTPSEGMTRYRVSVG
HKDGVKPGQLVGALANEGGIEGARIGRIDIRNAFSVVELPSGLPSTILTKMARARVSGRP
LEISEDSAPERAPRRRRDEGDAPISRRERA
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgacttctgtcgcttcgccgaccttcggcgatcttgctctattgcctgccgtt
ctgactgctgttgaatctcagggctacgtaactccctcgcctattcaggcgcagaccatt
cctgcgttgctcgaaggccgggatatgctgggccaggcgcaaaccggtaccggtaaaacc
gctgcgttcgcattgccattgttatcgcgtctggaactgacgcgccgcgagcctcaggtg
ctggtcatggcaccgactcgcgagcttgctcaacaggttgctgtctcattcagcaaatac
ggccaaaatcttaaaggcctcgaagttgcgaccctgtgtggcggtcaagagtaccgcgaa
cagctcggcgcgctgaagcgcggtgcccaggttgttgtcggcactcctggccggattatc
gaccatctcgaccgcggcagtctgaaactcgacggcctgtccgcactcgtgctggacgaa
gcggacgaaatgctgcgtatgggctttatcgacgacgtaaaacgcgtggttgccgatacc
ccgaaagatgcccggcgcgtgttcttctccgcgaccctgccgactgaaatcgaacgtatc
gttaaccgctacctggtagacccggttaaagtcgcgatcgaaaaaggcacaacgaccggc
gaaaatatcgaacagcgcatcgtgcgtgttgacggtggcgccaagcttgaagcactggca
cgtattctcgaagtcgagccggtcgacggcgccattgtctttgtgcgtacccgtgccgcc
tgtaccacgctcgtagagcaactgactgctcgtggtgtcaatgccgctggtctgtcaggt
gatctcgaccagagtctgcgtgagcgcaccattacccgcttgaagcgtggcaaggtcgac
gtgctgatcgccaccgatgtggccgcgcgcggtctagacgtatcgcgtattacccatgtc
atcaactacgacctgccccaggatgcggaagcctacacgcaccgtattggccgtactggc
cgtgccggtcgtagcggtatcgcgattacctttgctggtttccgtgaaggccgcaaagtg
ggctggatggagcaggcaactggtcagaaaatggccgatatgccgctacctgatgaatcc
gctatccgtgcgcaccgcgatgaagttttccatcagcgcgtcgttgcctcgttaaccaaa
ggcgcagacgagcagcgtgcgctgatcgaacgtctggtagaagaaggtcacgacccggtc
gaattggcctgtgcgttttctgccatggcccgcgctgatgaagcaccgattggtcgcctg
caggcaccgcgcaaagagaagccctcgcgtgatggcgcgtctggcggtaagccgggtgct
cgtcgtgagcgttcaagcacgcccagcgaaggcatgacccgctaccgcgtttccgtcggc
cataaagacggcgttaagcccggtcaactggtcggcgctctagctaacgaaggcggtatc
gaaggcgcgcgcattggccgtatcgatatccgtaacgccttctcggtggttgaactgccc
agcggtttgccgtccaccatcctgactaaaatggcccgtgcccgcgtatctggccgtccg
ttggaaatcagcgaagatagcgccccggagcgtgctccgcgccgtcgtcgtgatgaaggt
gatgcgcctattagtcgccgcgaacgcgcttaa
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