Halomonas sp. SH5A2: HXW73_17290
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Entry
HXW73_17290 CDS
T09591
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hash
Halomonas sp. SH5A2
Pathway
hash03420
Nucleotide excision repair
hash03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hash00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HXW73_17290 (uvrD)
03430 Mismatch repair
HXW73_17290 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hash03400
]
HXW73_17290 (uvrD)
Enzymes [BR:
hash01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HXW73_17290 (uvrD)
DNA repair and recombination proteins [BR:
hash03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HXW73_17290 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
HXW73_17290 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Viral_helicase1
AAA_22
T2SSE
Motif
Other DBs
NCBI-ProteinID:
QNI04556
LinkDB
All DBs
Position
3752894..3755092
Genome browser
AA seq
732 aa
AA seq
DB search
MDDVTAILDQLNSDQREAVSAPQGNLLVLAGAGSGKTRVLVHRIAWLMQAEGLSPYALLA
VTFTNKAAREMRTRLEALLGLSLRHVWVGTFHSIAHRLLRTHWQDARLPQHFQIIDADDQ
LRLVKRLLKDYSIDDERYPPRQVQHFISGCKEEGLRPHQVNVDGDAYMGQMVELYERYQL
TCERGGLVDFGELLLRSLELLRDNPPLLKHYQERFGHVLVDEFQDTNTLQYAWLKLLTGM
QTPMTAVGDDDQSIYGWRGAKVENISRFEKEFPQTHTVRLEQNYRSTSAILEAANTLISH
NSERMGKNLWTDGIEGEPISIYAGFNDLEEARYIVDTIKEKVDEGLNRRDMAILYRSNAQ
SRLLEETLIRQGMPYRIYGGHRFYERLEIKNALAYLRLLLNRDDDASLERVINVPTRGIG
TRTVEIVRLRAREQNIPLWQALHDAIHDGTLKGRAGNAVQAFANLIEQLDNDAAGLPLHD
IIDHVTTKTGLIEHHKSERGEKGQARVENLEELVNAARAFTHGDAFETPEAGEGMAALET
FLSEAALNAGDHEAEEFEDSVQLMTLHSAKGLEFPVVFIAGVEEGLFPHKMSLEEPGRLE
EERRLCYVGVTRAMQKLYLTHAETRRLHGKEVFPRPSRFLRELPPHLLEEVRLRGHISRP
VTASRSSFTQQSVEGSDDLPSLHVGQGVEHPVFGEGIILNAEGEGARARVQVSFEGEGVK
WLVLGFAKLTPL
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgtcacggcgatactcgatcagcttaactccgaccagcgcgaagcggtcagc
gcccctcaaggcaacctgttggtactggcgggcgcgggctcgggcaaaacccgcgtgctg
gtgcaccgtatcgcctggctgatgcaggccgagggcctgtcgccctacgcgctgctggcc
gtgacctttaccaacaaggccgcgcgtgaaatgcgcacccgtctggaagcgctgctgggg
ctgtctttgcgccatgtatgggtgggcaccttccactcgattgcccatcgcctgctgcgc
acccactggcaggatgcgcggctgccgcagcactttcagattatcgacgccgacgaccag
ctacgcctggtaaaacgcctgctgaaagactactccatcgacgacgaacgctacccgccg
cgtcaggtacagcattttatatccggctgtaaggaagaaggcctgcgcccccaccaggtc
aatgtggacggcgatgcctacatgggccagatggtcgagctctacgagcgctaccagctg
acctgcgaacgcggtggcctggtcgatttcggtgagttgctgctcagaagcctggagcta
ctgcgcgataacccgccgctgttgaagcactaccaggagcgctttggccatgtgctggtg
gatgagtttcaagacaccaatacgctgcaatacgcctggctaaaactgctgaccggcatg
caaacgccgatgaccgccgtcggtgatgacgatcagtcgatctacggctggcgaggtgcc
aaggtcgaaaatatcagccgctttgagaaggagttcccgcaaactcataccgtacggctc
gagcagaactatcgctctaccagcgcgattctggaagctgccaatacgctgatcagccac
aacagcgaacggatgggcaaaaacctgtggaccgacggcatcgaaggcgagccgatctcg
atctacgccgggtttaacgacctggaagaagcccgttatatcgtcgataccatcaaagag
aaggtcgatgaaggcctcaaccgccgtgatatggcgattctctaccgttccaacgcccag
tcacggctgctggaagagacattgatacgccagggcatgccctaccgtatctacggcggc
caccgcttctatgaacgactggaaatcaaaaacgccctggcctacctgcgcctgttgctc
aaccgcgacgacgacgcttccctggagcgggtgatcaacgtgcccacccgcggcattggt
acccgcacggtggaaatcgtccgcctgcgcgcccgcgaacagaacattccgctgtggcag
gcgctgcacgacgcgatacacgacggcacgctgaaaggccgcgcgggcaacgcggtgcag
gcgtttgccaacctgatcgagcagttggataacgacgctgccgggctgcccctgcacgac
atcatcgaccacgtgaccaccaaaacgggcctgatcgagcatcacaaaagcgaacgcggc
gaaaagggccaagcacgggtcgaaaacctcgaagagctggtcaatgctgcccgggccttc
acccacggcgatgccttcgaaaccccggaagccggtgagggcatggcggcactggaaacg
tttctctcggaagccgccctcaatgccggcgatcacgaggccgaagagtttgaagacagc
gtgcagctgatgacgctgcactcggcgaagggcctagagttccccgtggtgtttattgcc
ggcgtcgaggaagggctgtttccgcacaagatgtcgctggaggagccgggcaggctcgag
gaagagcgtcggctgtgttacgtcggcgtgacccgcgcgatgcagaagctttacctcacc
cacgccgagacccgccgcctgcatggcaaagaggtgtttccgcgcccctcgcgctttctg
cgcgaactgcccccgcacctgcttgaagaagtccgcctgcgcgggcatatttcccgcccg
gtcaccgcgtcgcgctcctcctttacccagcaaagcgtcgagggcagcgacgacctgccc
agcctgcacgttggccaaggggtagaacacccggtcttcggtgaagggatcatccttaac
gcggaaggtgaaggtgcccgcgcccgtgtccaggtcagctttgaaggcgagggcgtcaaa
tggctggtgttaggctttgccaagctaacgccgctttaa
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