Haliotis asinina (tropical abalone): 137255673
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Entry
137255673 CDS
T10448
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi03030
DNA replication
hasi03420
Nucleotide excision repair
hasi03430
Mismatch repair
hasi03440
Homologous recombination
hasi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
137255673
03420 Nucleotide excision repair
137255673
03430 Mismatch repair
137255673
03440 Homologous recombination
137255673
03460 Fanconi anemia pathway
137255673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hasi03000
]
137255673
03032 DNA replication proteins [BR:
hasi03032
]
137255673
03400 DNA repair and recombination proteins [BR:
hasi03400
]
137255673
Transcription factors [BR:
hasi03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
137255673
DNA replication proteins [BR:
hasi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
137255673
DNA repair and recombination proteins [BR:
hasi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
137255673
MMR (mismatch excision repair)
137255673
DSBR (double strand breaks repair)
HR (homologous recombination)
137255673
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CompInhib_SCIN
Motif
Other DBs
NCBI-GeneID:
137255673
NCBI-ProteinID:
XP_067649258
LinkDB
All DBs
Position
1:94202895..94215603
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AA seq
621 aa
AA seq
DB search
MPPQLSSGSIEEIIAGNSPDNPILQIMSSKKISAGGGADRYRLLLSDGKHSYSHAMLATQ
LNDLMEQNEIDNLSVVQVNKYLCNTLQGDRRVMILLDVKVVKKGSEVGERIGNPVPYKPG
QENTAPQQNGQTAVSNGPAQVNGVSSSSSNQSPYNRTLNTNRSPQKPSGGASNYSIRGGS
GPSTPGSSRVHTIASLTPYQNRWRIRARVTQKSGIRTWSNSRGEGKLFSVNFLDESGEIR
ATGFNEAVDRFYELLEVNKVYYVSRATLKTANKQYSNVQNDYEMTFNPDSQIEICNEECN
LPTMTFEFVKINELEKHQSNAIIDVVGVVKVCQDLSTVVGRQSQKEITKRDLQIVDQSGM
GVNLTLWGNDAQNFDGSGSPVIAVKGARLSDYGGRSLSVLASSQLIVNPDIREAHMLRGW
FDRDGQNMAFDSYRNEGGSGGAGMATNWKTFQQVKMDSSASVDKADYFTSKGTVVFMKKD
NCMYKACPTEQCNKKLVDQGNGLYRCEKCAREFPNYKWRMILNANLADYSDNQWATCFQD
SAEVLLGVKADELGSLRDTNEASFDQVFQDALFKSYIFKFRAKMEMYNDEQRLKTVCMSA
TPIDWTEYGKRLIDEINKLAG
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgcctcctcaactttcttccggatccatcgaggaaatcatcgctgggaactcacctgat
aatccaatacttcagataatgagttccaagaaaatctcagcaggtggaggtgcggacaga
tatcggttgctgttgtcagatgggaaacacagctactctcatgccatgctggcgacacag
ttgaacgatttgatggaacaaaatgagattgacaacttaagtgtcgttcaggtcaacaag
tacctgtgtaacaccctacaaggtgacagacgagttatgatcctgctggatgtgaaggtt
gtgaagaaggggtcagaggtaggagagaggattggaaatcctgtaccttacaaacctggc
caagagaacactgcaccacagcagaacgggcagactgcagtttctaatggaccggcccaa
gtgaacggtgtcagcagttcatccagtaaccagtctccatacaacagaactctcaacaca
aatcgatccccacagaaaccatctgggggtgccagcaactacagtatccggggtggatct
ggcccatccacccctgggtcatctcgagtccacactattgcaagtctcactccctaccag
aacaggtggcggatcagggctcgggttacacagaagtctgggatccggacgtggagcaat
tcgcgtggcgagggaaaactcttcagtgtgaacttcctggacgagtcaggggaaatccga
gctacaggatttaatgaagctgtcgacagattctatgaactcctggaagtgaacaaggtc
tactatgtcagtcgtgctacactcaagacagccaacaagcagtactcaaatgttcagaat
gactacgagatgaccttcaaccccgactcccagattgaaatctgtaacgaggaatgcaac
ctcccaaccatgacctttgaatttgtcaagataaatgaactggaaaaacatcagtcaaat
gctattatagatgtagtgggcgtggttaaggtgtgccaggatctctccactgtagttgga
cgtcaaagtcagaaggagatcacaaaacgagatctacagatcgtcgaccaatcagggatg
ggagtcaacctcactctgtggggaaacgatgcccagaacttcgatggcagtggcagtcca
gtgatagctgtgaaaggtgcaaggctgtcagactatggagggcgatctctgtctgtgcta
gccagcagtcagcttatcgttaacccagatatacgagaagcacacatgctgcggggctgg
tttgatcgagatggacaaaacatggcctttgacagttaccgcaatgagggaggcagtggt
ggggcaggcatggccacaaactggaagacattccagcaggtcaagatggacagctccgcc
tctgtggacaaggcagactacttcaccagcaagggcactgttgttttcatgaagaaagac
aactgcatgtacaaggcttgccccacagaacagtgtaacaagaagctggtggaccagggc
aatggcttgtaccgctgtgaaaagtgtgctcgtgagttccccaactacaagtggaggatg
atcctcaatgcaaatcttgcggactactcggacaatcagtgggccacatgcttccaggat
tccgccgaggtcctcctgggagtaaaagctgatgagctgggaagtctccgcgacacaaat
gaagccagttttgaccaggttttccaggatgccctgttcaagtcatacatctttaaattc
cgtgccaagatggaaatgtacaatgatgagcagcgcctgaagacagtatgtatgtcagcg
acgccaattgattggacagaatatgggaagaggctgattgacgaaattaacaaattagcg
ggctga
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