Haliotis asinina (tropical abalone): 137256254
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Entry
137256254 CDS
T10448
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A-like isoform X1
KO
K12821
pre-mRNA-processing factor 40
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137256254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hasi03041
]
137256254
Spliceosome [BR:
hasi03041
]
Complex A
U1 snRNP components
U1 related factors
137256254
Complex B
137256254
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Gene cluster
GFIT
Motif
Pfam:
FF
FF_PRPF40A
WW
WW_TCERG1
Motif
Other DBs
NCBI-GeneID:
137256254
NCBI-ProteinID:
XP_067650085
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Position
11:complement(25592395..25633352)
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AA seq
865 aa
AA seq
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MAASSNQGGPPNPMMRPPFGMPPGNAPPPGFIPPPGMGGHGDMNQPPPGIPGYSGPPSLP
PPGFPPGMPPPMGMPPPIFPGGTSTSSPVISASSTTAGDSGDKSVWTEHKAPDGRTYYYN
NVTKQSSWEKPDDLKSDTERLLSQCPWKEYKSDNGKVYYHNSQTKESKWTKPKDLEELEK
KLADQKARKELAPAVSAPMPQSLLKQSSTPSSAIQQAMQATLASIELPPAAPGGAPPAKE
VKPEDSDSGSDVEEIKQPKKEVPLVFKNKKEAVEAFKALLKEKEVPSNCSWEQAMKLIIN
DPRYGALKHLNEKKQAFNEYKTQRAKEEKDEQRLRAKQAKEDLEHFLCNNEKMNSTVKYW
KADNMFGDLEVWRAVNERDRRDLFDDVVHLLAKREKEEAKTLRKRNTKLFNEILDSMPSL
TYCTTWSEAQAMLLDNPRFTEDPDLQNMDKEDALVCFEDHIRMLEQEYDDERERERRRMK
RQQRKNRESFVVLLDELHDQGKLNSMSLWMDLYPIISQDLRFTMMLGQPGSTPLDLFKFY
VEDLKARFHDEKKIVKEILREKGFVVEVSTTYDDFASVISSDRRAISLDTGNIKLTYNSL
IEKAEAREKERLKDEARKLKRLEGSFKTLLKQLSPPIDLDTKWDDIRSKLEHEAAFEAIT
LESERMRLFREYVIAYEETCGHHHAKRKKSKKHKVKRSRSRSHSSDSEEEERRHKAKKKK
KSRSESRSPSPGTPSDREYEPERTSKKHKKKKKKKHISRSPSRSGYSSDEKHDHDRERER
DRDRDRDRDRERERDRDRDRDRDRERDSKSSRRKKSPTPSSRKDKHDKHASKKRDDDYDS
TESELSEGELEKRRRLLLQQLESDL
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctcttctaatcaaggaggacccccaaaccctatgatgagaccaccatttggg
atgcctcctgggaatgccccgcctccaggtttcattcccccacctggaatgggaggtcac
ggtgacatgaaccaacctcctcccggaataccaggctacagtgggccccccagcctgccc
cctcctggtttcccccctggcatgccgcctccgatggggatgcccccacccatattccct
ggaggcacttccacatcttcaccagtcatatctgcatcatcaactactgcaggggacagt
ggagacaagagtgtgtggacagaacacaaagctcctgatggaaggacgtactactacaac
aatgtcaccaagcagtccagctgggagaagccagacgacctgaagtctgacacagagcgg
ttgttgtcacagtgtccgtggaaggagtacaagtcggacaatggcaaggtgtactaccat
aactctcagacaaaggagagcaagtggaccaagccaaaggacctggaggaattggaaaaa
aagctagcagaccagaaagccaggaaggaactggcgcctgcagtgtctgccccgatgccc
cagtctctgctgaaacagtcatccacaccatcctcagccatccaacaggccatgcaggcc
accctagcctccatagagctgcctccagcagccccggggggagcacccccagccaaggaa
gtcaagccagaggactcagacagtggctcggatgtggaagagataaagcagcccaagaaa
gaagtcccattggttttcaaaaacaagaaggaggctgttgaggcatttaaggctctactg
aaggagaaggaggtaccatccaactgttcgtgggaacaagccatgaaactgatcatcaat
gacccacgctatggagcgctcaaacatctgaatgagaaaaaacaagcattcaatgaatac
aagacacagagggccaaagaggagaaggatgagcagcgactccgggccaaacaggccaag
gaagacttggaacatttcctctgtaacaatgagaagatgaactctacagtgaaatactgg
aaggctgacaatatgtttggggacctggaggtgtggcgagctgtcaacgagcgagaccgc
cgggatctctttgatgatgtggtgcatctacttgctaagcgggaaaaggaggaagccaag
acactccgaaaacgcaacactaaactattcaatgaaatccttgacagcatgccgagtctg
acatactgcactacatggtcagaagctcaggccatgctgcttgataatccccgcttcacg
gaggacccagatctacaaaatatggacaaggaagatgccctggtctgttttgaggaccac
atccgcatgctggagcaggagtatgacgacgagcgggagcgggagagacggaggatgaag
cgtcagcaacgcaagaacagggagagctttgtggttctcctggatgagctgcatgaccag
ggcaagctcaactccatgtctctgtggatggacctgtatcccatcattagtcaagacctc
cgcttcaccatgatgcttgggcaaccaggttccacgccacttgacctcttcaagttctat
gttgaggacctcaaggcccgcttccatgacgagaagaagattgtgaaggagatactccgg
gagaagggttttgtggtggaggtcagcacgacatatgatgactttgcatctgtcatcagc
agtgacaggagggccatcagcctcgacaccggcaacatcaagctcacctacaacagtctg
attgagaaggcagaagctcgggagaaggaaagactgaaggatgaggccaggaagctgaag
cgactggagggatccttcaagactctgttgaagcaactgtctcctcccatagacctggac
accaagtgggatgatataagatcaaagctagaacatgaggcagcgtttgaggcaatcact
ctcgagtctgaacgaatgcgactctttagggagtatgtgattgcttatgaggagacatgt
gggcaccaccatgcaaagaggaagaaatcaaagaaacacaaggtcaagaggtcaaggtca
agatcacactctagtgattcagaagaagaagaaagaagacacaaagctaaaaagaagaag
aaatcacggtctgagtcaaggtctcccagtcctggaacaccttcagatagagagtatgag
cctgagaggacatccaagaaacacaagaaaaagaaaaagaagaagcacatttctagatct
ccatcacgttctggctattcaagtgacgagaaacatgatcatgatcgagaaagagaaaga
gatcgagatcgagacagggaccgtgatcgggaacgtgagcgggaccgggacagagacagg
gaccgagacagagagagggatagtaaatcttctcgtcggaagaaatccccaacaccctcc
tccaggaaagacaagcatgataagcatgcttccaagaagagagatgatgactacgacagc
acagagagtgagttgagtgaaggagagttagagaaaaggaggaggttgttactgcagcaa
ctggagagtgacttataa
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