Haliotis asinina (tropical abalone): 137257828
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Entry
137257828 CDS
T10448
Name
(RefSeq) retinoblastoma-like protein 1 isoform X1
KO
K04681
retinoblastoma-like protein 1
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
137257828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hasi03000
]
137257828
Transcription factors [BR:
hasi03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
137257828
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
SLH
Motif
Other DBs
NCBI-GeneID:
137257828
NCBI-ProteinID:
XP_067651398
LinkDB
All DBs
Position
12:complement(38164939..38204116)
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AA seq
1080 aa
AA seq
DB search
MGLSDEGEANVQQRYEELCLDLNMDKTAEGEAWESYQRIQQNYTLEGDQLHWLACALYEA
CRRTVVPTVGRGQVEGNCVSLTRLLRSAKFSLIQFFNKMKKWADMASLPQEFRNKVDRLE
RNFAVSTVIFKKFEPIFLDIFEAPNEISRQQRSRKPRKSSHSKSRVSSSERNSRLPCTSA
DVFNFAWTMFVQVKGNFPAISDDLVNSYHLLVCCVDWIYANALLGGRKDLLNPEFSGLPD
NYHSRDWKAPVEAPCIIQLLCDKHDGLVVEAKTIKEHWWKPHIKKLYEKRILKGKVETLS
AILETGNFEVNSKSINNAYEEYVLSVGDFDERIFLGEEAEEEIGTPGKPGTDFAEQMAKK
KSLRQHVDQTRSLAPSTPLTGRYYLKDKDPSVTPVSTATQSVSRLQALLSGRRTSPSDAL
LEIFRECSKDPKEEIVSRVQEMGEVFCTHYVQPSEGHPGAHIDFARRRLQLGESLYYKML
ENIVQGEKKRIGKDQKSNPATSVQGLLEHSMFHRSLFACCLEIVIFSYNSQRTFPWIVDV
FEMSPYHLYKVIEICIRAEEGLSRDVVKHLNHIEETILESLAWKRDSPLWDAIQEHSEDI
PMCEEVTPANQIDNNSNITSSPLTHPRVKSLVGEGRNTQRTVKVVDPLQSPPGPSAVDRF
SSPQPGSVKRQLFGPGAQQLSTHAATHTELVKQLNSGVSDTVVATTQTDSNTLSTGQTLI
AVTSDGRQVLIPVQTLVSTSPGKQVPPSPGKSNKPKKTGSLPLFFRKVYHLVSVRLRDLC
DRLEVTDEDLRRKMWTCFEHVFVHNLDLMKDRHIDQLLMCAIYVMAKVCQKPLTFQQIMK
CYRVQPQAQSHVYRSVLLIGRHRNASGSSESSKSGASGSSSPVNKEDEKDRDKKKTEMLG
FIRSDSTLPVPHPNSQPPTPTKLLGGEATFDFERGDLIQFYNAVFVKRIKSFALKFSSTN
ATSDVPPLSPLPLVRSQQASPRRVSSKYSVYISPHAGSMSHTTQPKGISFCINRSPAKDL
RAINNMVRMGERKLTGKRILEVDHDDDVDDSPSKKMCSSRLMRRLQDVNSERQEANGIVN
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atgggcttgtccgacgagggagaggctaatgtgcaacaacgatatgaagaactatgtttg
gacttaaatatggacaaaaccgccgagggcgaggcgtgggaatcgtaccaaaggattcag
caaaattatactcttgaaggtgaccagcttcactggttggcatgcgctttatatgaagca
tgtcgacgaactgtggtgccaactgtgggacggggacaagtagaagggaactgcgtctca
ctaacaaggttgctgcgatcagcaaaattcagtttgatccagttctttaacaaaatgaaa
aaatgggcggatatggcgagtctgcctcaagagtttaggaataaagttgaccgcctagag
agaaattttgcagtgtcaacggtgatcttcaagaaattcgagcccattttcttggatatt
tttgaagcaccgaatgaaatatcacgacagcagaggagcagaaaaccgcgaaaatctagt
catagcaagtcccgtgtatcttcatctgaacggaacagccgcctgccctgcacatccgca
gatgttttcaacttcgcctggacaatgtttgttcaagtcaaaggtaactttccagccatc
agtgacgacctcgtcaactcctaccatctgctggtgtgctgtgtcgattggatctatgct
aacgctcttcttggaggacgcaaagatttgctcaacccagaattctcaggtttgccggac
aactaccacagtagagactggaaggcgccggtagaggctccgtgcattatccaactgctg
tgtgacaagcatgacggccttgttgtggaggccaagacgatcaaggaacactggtggaag
ccacacattaagaagctctacgagaagcggattctgaaagggaaagttgagactttgtca
gcgattttggagacaggaaacttcgaagtcaatagcaagtcgatcaacaatgcatatgag
gagtatgtgctgagtgtcggagattttgatgaacggatctttctcggcgaggaggcagag
gaggagatcggtacacctgggaaacctggaacggactttgcagaacagatggcgaagaaa
aagtccctgaggcagcacgtggaccagacccgaagcctggcaccatctaccccactgacc
gggagatattacctaaaggacaaggacccaagcgtcacaccagtttccacagcgacgcag
agtgttagccgactacaagctctcctgtcaggaaggaggacttctcccagtgatgctcta
ttggaaatattcagagagtgcagcaaagaccctaaagaggagattgtttctcgagttcag
gaaatgggggaggtcttctgtacacattatgttcaaccttcagagggtcatcctggcgcc
cacattgactttgctcgtcgtcgccttcagctgggggagagcctctactacaagatgttg
gaaaacattgtgcaaggggaaaagaaacggattggcaaggaccagaaatcaaacccagca
acatctgtgcaaggattactggaacactccatgttccatcggtcgctgttcgcctgctgt
ttggagattgtcatcttctcgtacaactcacaaagaacatttccttggattgtggatgtg
tttgagatgagcccctatcacctgtataaagtcatcgagatttgtatcagggcggaggaa
ggactttcacgggatgtcgtgaagcacctcaatcatattgaggagacgatattggagtca
ctggcgtggaagcgagactcccctttgtgggatgccatccaggagcacagtgaggacatc
cccatgtgtgaggaggtaacgcctgctaatcagattgacaacaacagcaatataacatcc
tccccactcacacatccccgagtgaaatctcttgttggagaaggtagaaatacacagaga
acagtcaaagttgtagaccccctccagtcacctcccggtccatcagctgttgaccgtttc
tcatcaccccagcccggcagtgtcaaacgccagctgttcgggccaggtgcccagcagctc
tcaacacacgcagcaacgcacacagagttagtaaagcagctcaacagcggcgtttcagac
accgttgtggccacgacacagactgactccaacaccctgtccacagggcaaaccctgata
gccgtcaccagtgatggaagacaggtacttatcccagtgcagaccctggtgtcaaccagt
cctggcaaacaagtcccaccctcccctggcaagtctaacaaacccaagaagactggctct
ctaccactgttctttagaaaggtgtatcatttagtgagcgttcgactacgtgacctgtgt
gacaggttagaggtcacagacgaggacctgcgacgcaagatgtggacatgttttgaacat
gtctttgtacataaccttgaccttatgaaggatcgtcatattgaccaactgcttatgtgt
gctatctatgttatggcgaaagtgtgccaaaaaccactaacattccagcaaatcatgaag
tgctacagagttcaaccacaggctcaaagtcatgtgtatcgcagtgtactgctcattggc
cgccaccgcaacgcgtccgggagcagtgagagcagcaagagtggtgctagtggctcgtca
tcccctgtcaacaaggaagacgagaaggaccgagacaaaaagaaaactgaaatgctagga
ttcattcgctctgacagtacccttcctgtcccgcaccccaacagtcagccccctacaccc
accaagctgctagggggtgaggcaacgtttgactttgagagaggagatctgatacagttc
tataacgctgtatttgtgaagagaataaagagttttgcactgaaattttcctcaacaaac
gcaacatcagatgtacctccgttgtccccactgccattggtgcgaagccagcaagcatcc
ccacgccgcgtttccagcaaatactctgtgtatatctcccctcacgcaggcagcatgtca
cacacaactcagccaaaaggcatctcattctgcataaacaggagcccagcaaaggacctg
cgtgcaataaataacatggtccgcatgggggagcgtaagttgacagggaagaggatcctt
gaggttgatcatgatgatgacgtcgatgacagcccatcaaagaaaatgtgttccagtcga
ctaatgcgccgtcttcaggatgtaaattcagagcgacaggaggcaaacggaatcgtcaac
tag
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