KEGG   Haliotis asinina (tropical abalone): 137257958
Entry
137257958         CDS       T10448                                 
Name
(RefSeq) nucleoporin SEH1-like
  KO
K14299  nucleoporin SEH1
Organism
hasi  Haliotis asinina (tropical abalone)
Pathway
hasi03013  Nucleocytoplasmic transport
hasi04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:hasi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    137257958
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    137257958
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hasi03019]
    137257958
   04131 Membrane trafficking [BR:hasi04131]
    137257958
Messenger RNA biogenesis [BR:hasi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     137257958
Membrane trafficking [BR:hasi04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    137257958
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_WDR3_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 ANAPC4_WD40 Ge1_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st EIF3I Beta-prop_IFT140_1st Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR35_TULP_N Beta-prop_TEP1_C
Other DBs
NCBI-GeneID: 137257958
NCBI-ProteinID: XP_067651579
LinkDB
Position
12:complement(29549385..29575103)
AA seq 378 aa
MYVAKSIPVDHKDLIHDVSYDFHGTRMATCSSDQSVKVWDLGEDGEWHCTANWKTHSGSV
WRVTWAHPEFGQVLATCSFDRTAAVWEELVGEHGKGEGQTPWVNRGNLVDSRTSVTDVKF
GPQYLGLQLATCSADGIVRIYEAVDVMNLSNWPLQHEISCRISCSCLSWNHSRVHPPMIA
VGSDDPNPAAGAKVHIYEYNDNARKWNKVESLSMVTDPVHDVAFAPNLGRSYHLLAITAK
DLKIISLKPLRKDVSLGAQASLTKFEMRQVASFGDHESQVWRVSWNVTGTILASSGDDGC
VRLWKANYLDSWKSISVMKGDGSPQDSARNHNNVPQAVSVANGNTEGVRTPPPGTMNIKR
LSNWPFTSVQKDQAKLFY
NT seq 1137 nt   +upstreamnt  +downstreamnt
atgtatgtggccaaatccatcccagttgatcataaagacttgatccacgatgtctcctat
gatttccacggaacaaggatggccacatgttccagcgaccaaagtgtgaaggtgtgggac
ttgggagaagatggagagtggcactgtacagctaactggaagacacacagtggctcagtg
tggagagtgacgtgggcacatcctgagtttgggcaggtgctagctacatgctccttcgac
agaacagcagcagtttgggaggagctggtgggagaacacggcaaaggtgaaggtcagaca
ccatgggtcaacaggggaaaccttgtggacagtcgaacttctgtgacggatgtcaagttt
ggacctcagtatttgggcttgcagctggctacatgttctgctgatgggattgtccgtatc
tacgaggctgttgatgtgatgaacctcagtaactggcctctccagcatgagatctcatgt
agaatcagctgcagctgtttgtcctggaaccactcaagagtacatccgccaatgatagct
gttggcagtgatgaccctaaccctgctgctggggcgaaagtccacatctacgagtacaat
gataatgcaagaaaatggaacaaagttgagagtttatccatggtgactgaccccgtccat
gatgttgccttcgctccaaacttggggcggtcataccatctgttggcaatcactgccaag
gatctgaagattatttccctgaagccattgaggaaggatgtttccttaggagcacaggcc
agtctgacgaagtttgagatgagacaagtggcaagttttggtgaccatgagtcccaggtg
tggcgggtctcctggaatgtgactggtacaattctagcatcatctggagatgatggatgt
gtgcggctatggaaagcaaactatctggactcctggaagagtatctcagtgatgaagggc
gatggatcaccacaagactccgctcggaaccacaacaatgtgccccaagcagtgtcggtt
gccaatggcaacactgaaggcgtcaggaccccacctcctggaacaatgaacatcaagcga
ctcagcaactggcccttcacatctgtgcagaaagatcaggccaagctcttctactaa

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