Haliotis asinina (tropical abalone): 137258483
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Entry
137258483 CDS
T10448
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137258483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hasi03019
]
137258483
Messenger RNA biogenesis [BR:
hasi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
137258483
mRNA degradation factors
5'-3' decay
Decapping complex
137258483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40_WDHD1_1st
WD40
Beta-prop_HPS5
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Prp19
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
137258483
NCBI-ProteinID:
XP_067652269
LinkDB
All DBs
Position
12:53736683..53776676
Genome browser
AA seq
1400 aa
AA seq
DB search
MDTQDSAQSSLNSTDTSQLLRELQALNLDRSPGSSHGSFGTGRNIPGTGDRDLPASGEAT
LTQLMMTMYSSAPKQQIVLQGNDNQNSFSVYGRDVDVFLGETRVGESLVTTAGSNKVKIT
PVVNYDWEPKYYIGNLVAVHRDNDFVAYVLKGKSNGVVRVISRKSAERVLLKDFNGRVID
VAFAHTDEILLAAVDEIGNLFVHEIKEEDGKVVSSLILHVKHPQTTPSSEFHRVIWCPYI
PEDCEEALTDASSQDASRVLVLTHDAVAEIWSVDMVTKEHGCGPHYPNTVETGLITINSH
SKPIVDAAFSPDGTAMATASLDGEVKFFQVYMQEGTSPRCLHQWKPHDGKPMSCLFFLDD
HKNLSADAQFWKYAVTGANQNQELKIWSCESWNCLQTIRFVNPPNMEVGALADVSLKAGL
DLGARYLVLSDRMRKMLYVLQIHQEGTSTTAHVSSVSEFLLAQPCLSYAILDASTKKLKK
SPNDSHLDEITTGDLDGDTTDDINRLHRPEETTTGVQLRLYAVHSKALQELLIRYKPESS
VPPPSTPSVSSISHDETGLRDALSDISMSVEQSLPESHGSSSSAIHDNSNPVLLTPDAFT
SPSPNNKTVSVQNSLEHVRGSGTMDHVRGSGSSTSSFTHVTPMNDEIYTPRSSASGDRTV
MSPGSNIAHTPSSKGDAQSQDVTPTNMPLPPIDSVEEEELATPKRGPESEKGDALNHSAQ
EVLDDFFTQGGTSNRSLDSQSSTGRFDVSEIVPPPSGQPEVRHRTDYDENDQEVAEVLGE
SYVAAEEEGGDAEEFQEGETTGEDIHVPRAWPKPPDVPGVNQNLSSEAVLRDNSSREETQ
DDDDDDDEEEGDDGDDEAEIEEEIEVVEEGSEEDQQQNRMSPRLAERISKVKQSPRSAYG
ASESVSGPIRGGADRESMRELQKNVQDLTSLLQAQQMHIAELQQQIARQHEQQLELQQQK
EEQWRLQQVAATQPGLQEQMQRIEDVMTSRIERVLTQHLGRQTQTLQDVMTRTEGRHRQE
QERLQTTVTQSVSQTITNNLERAVRAEIKNTVVPTVTKILDPVKDQLHQDLAHKLTATDA
LLKDNIAKMVRSRQTVEAIANATGSAVQAPIQAAYREAFQNMVVPSFERASQSMFLQVND
AFQRGTTEYASQLEGHLERIRQRQQDSRDPIVKQLQSLVDNFQVTSGEMKTEILNTLQSE
LNTSLQNALANLQEKTLNHVREAVKEEVSVAVREHGASLSDQLMNYVRSGAATPVQISPD
LGHLQTLRTSVINAIRVGNINEAFQTALSASNLDLVMFTCENVNPSLVFGQEPCPLKQPV
LLSLVNQLSADFTSHTELKIKYLEEAVISLDPSHPLTAEHMHGVLNGLTQKLKVFMAQHP
SDKLTRSFKMLAMASQSLIT
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atggatacccaagacagcgcccagtcgtctctgaatagtaccgatacaagtcagctcttg
agagaattacaagctctgaacttagacagatcacccggctcatcacatggaagtttcgga
acaggaagaaatatccctggaacaggggatagggacttgccagcatcaggggaagcaact
ctgacccaactgatgatgacaatgtatagttcagcaccaaaacaacagatagtgctgcaa
ggcaatgacaaccagaacagcttcagcgtgtatgggcgagacgttgatgtattccttggt
gagacacgtgtgggagagtcacttgttaccactgctggtagcaataaggtaaagataacc
cctgtggtgaactatgactgggaaccaaagtattatatcggcaatttggtggctgtacac
agagacaatgactttgtggcatatgtacttaaaggtaaatcaaatggagttgtccgagtc
atctcaagaaaaagtgcagagcgagtgctgttaaaggattttaatggacgggttattgat
gttgcctttgcccatactgatgaaatcctcctggctgctgttgatgaaatagggaacttg
tttgtgcatgaaattaaagaagaagatggaaaagttgtctcctccttgatcctgcacgtg
aagcacccacagactacgccatcctcagagttccatcgagtcatctggtgtccctacatc
cctgaggactgtgaagaggccttgacagacgcctcgtcacaggatgcctcgcgggtgctt
gtcctcacccatgatgcagtggcggagatatggagcgttgacatggtaaccaaggaacat
gggtgtggccctcactacccaaacacagtagagactggcctcattaccatcaacagtcac
agcaagccaattgttgatgctgcattttcccccgatggcacagcgatggcaacagctagt
ctcgatggagaggttaaattctttcaggtctacatgcaagagggcacctctcccaggtgt
ctgcaccagtggaaacctcacgatggcaagccgatgtcatgtctcttcttcctggatgat
cacaagaaccttagcgcagatgcccagttttggaagtacgcagtgacaggagccaatcaa
aaccaagagctaaagatatggagctgtgagtcgtggaactgtctacagacaatcagattc
gtgaacccaccgaacatggaagttggtgcccttgccgacgtgtccttgaaggcaggcctg
gatctaggtgcgaggtacctggtgctgtcagacaggatgcggaagatgctgtacgtatta
caaatccaccaggagggcacttcaaccacagcacatgtcagctctgtgtcagagttcctg
cttgcccagccctgtctgagttatgccatcctagatgccagcaccaagaagctgaagaaa
tccccaaatgactcccatctggatgaaataaccacaggggaccttgatggcgacaccaca
gacgacatcaaccgcctccacaggccagaggagactactacaggcgttcagttaagactc
tatgcagttcattcaaaagctctgcaggagttgctgatccgctacaaaccagaatcttct
gtgccgcccccctccacaccctccgtcagctccatttctcatgatgagacaggtttgcgt
gatgccttgtctgacatcagtatgagtgtagagcagagtctacctgagagccacggtagc
agctcctccgccatccatgacaactccaacccagtgcttctcacacctgatgcatttacc
agcccaagtccaaacaacaaaacagtgtcagtgcagaactctttggaacatgttcgaggc
agtggaacgatggatcatgtgcgaggcagtggttctagtaccagtagtttcactcacgtc
acccccatgaatgatgagatctacaccccacggagctcagcatctggtgacaggacagtc
atgtctcctggcagtaatattgcccacacaccttcgtccaagggggacgcccagtctcaa
gacgtgacacccacaaacatgccactccctcccatagactcagtggaggaagaggaactt
gccacgcccaagaggggaccagaatcagagaagggggatgctctcaatcattcagcacaa
gaggtgctggatgatttcttcacacagggagggacgtccaaccggtcactggatagccag
tccagcacgggaaggtttgacgtgagcgagatcgttccccctccttctggccaaccagag
gtcaggcaccgcaccgactacgatgagaatgaccaggaggtggctgaagtattaggtgag
agttatgttgctgctgaggaggaaggaggtgatgctgaagagttccaggaaggggagact
actggagaggacatacatgtccctcgtgcctggccgaaaccaccagatgtacctggagtt
aaccagaacctgtcatcggaggctgttttgcgagacaacagctcaagggaggagacccag
gatgatgatgatgacgatgatgaagaagaaggtgatgatggcgatgatgaggcagagatt
gaagaggaaatcgaggttgtggaggagggcagcgaggaggaccagcagcagaatagaatg
tctccaagattagctgagagaatcagcaaagtaaagcagtcgccacggtctgcatatgga
gcaagcgagtctgtttcggggcctattcgagggggtgcagatcgggagtcgatgagagag
ctacagaagaacgtgcaggacttgacgtcgctgctgcaagcgcagcagatgcacatcgcg
gagctacagcagcagattgcacggcaacatgagcagcagctggagctgcagcagcagaag
gaggaacagtggcggctgcagcaggtggccgccacgcagccggggctgcaggaacagatg
cagaggatcgaggacgtcatgacgtcacgcatagagcgcgttctcactcagcacttgggc
aggcagactcagacattacaagatgtgatgacccgcacagaaggccgacatcgccaggaa
caggagaggctgcagaccacagtaacgcaatccgtcagtcaaaccatcaccaacaacctg
gagagagctgtccgtgccgagattaagaacactgtggtccccacagtgacgaaaatcctg
gatccagttaaagatcaactccatcaagaccttgctcacaaactcactgccactgatgca
ctactgaaagacaacattgctaagatggtcaggtctcggcaaaccgtggaggccatagcc
aatgctactggtagtgctgtccaggcgcccatacaagctgcttatagagaggctttccag
aacatggtggtgccatcatttgagcgagcctctcagagtatgttcctgcaggttaacgat
gccttccagagaggcaccactgaatatgcgagtcagctggagggccacctagaacgtatc
cggcagcgacagcaggattcacgtgaccccattgtgaagcagctgcagtcattggtggac
aacttccaagtgacctccggcgagatgaagacagagatcctgaacacattacagtcggaa
ctcaacaccagtctgcagaatgctctggcaaaccttcaggagaagactctcaaccatgtg
cgtgaggcggtgaaggaggaggtcagtgtggcggtccgggagcatggcgccagtctctcc
gaccagctgatgaactacgtacgctcaggagctgccacgccggtacagatatctcctgac
ctagggcacctgcagacgctgaggacatcagtgatcaatgctatcagggttggcaacata
aacgaagctttccaaactgcactgtcggcatctaacctggatctggtgatgttcacatgt
gagaatgtgaacccgtcccttgtgttcggtcaggaaccctgtccccttaagcagccagtg
cttctatccctcgtcaaccagctgtctgcagacttcacctcacacacagagctgaagatc
aaatacttggaagaggcagtgattagtttggaccccagccaccccttaactgcggaacat
atgcatggggtgttgaatggactcacccagaaactgaaagtctttatggcacaacatccc
agcgataaactgacccgatcattcaagatgttggcaatggcgtcccagtctctcattaca
tga
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