Haliotis asinina (tropical abalone): 137261044
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Entry
137261044 CDS
T10448
Name
(RefSeq) transcription elongation factor SPT5-like
KO
K15172
transcription elongation factor SPT5
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
137261044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hasi03021
]
137261044
03019 Messenger RNA biogenesis [BR:
hasi03019
]
137261044
Transcription machinery [BR:
hasi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
137261044
RNA polymerase I system
137261044
Messenger RNA biogenesis [BR:
hasi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
137261044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW4_SPT5
KOW5_SPT5
KOW6_SPT5
KOW
KOW2_Spt5
Spt5-NGN
KOW7_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
DUF3912
DUF5847
Motif
Other DBs
NCBI-GeneID:
137261044
NCBI-ProteinID:
XP_067654806
LinkDB
All DBs
Position
14:complement(49675065..49704182)
Genome browser
AA seq
1067 aa
AA seq
DB search
MSDSEDSDISDAESEGGQLDQSRGSDAGSDAGSEPGSPAGSEGGGSDGGGSGSDEGSDKE
EEEEEDDVEYDEDEDERQRRKKRARVSKFIIEEADVDDEGDEEDDVEWEEGAEDIIDKKT
MLDGNSAREMENHQRLRHLFDSQREDEIEEYYRQKYGETPAAERYGEGEEMSDEITQQGL
LPGVKDPNLWVVKCRMGEEKATVIHLMRKFIAYQFTDEPLQIKSVIAKEGLKGYIYIEAY
KQTHVKQAIEGVGNLRIGLWQQQMVPIKEMTDVMKVVKETTNLKSKSWVRLKRGVFKDDL
AQVDYVEPSQNVVHLKLIPRIDYSKPRGVFRTSASQEAEKNKKRKRRPAQKLFDIDGVRA
IGGDVSTDGDFLIFEGNRYNRKGFLFKSFVMSAIIPDGVKPTLSELERFDNTPEGLDVDL
VPQKKSSTTEVTHNLAPGDVVEVCEGELLHLQGRVIRVEGNKITIMPKHEDLKDPLEFPA
HELQKYFKMGDHVKVIRGRFEGDTGLIVRVEDNMVVLFSDLTMHELKVLPKDLQLCTDMA
TGVDSMGQYQFGDLVMIDAQTVGVIVRLEKENFQVLSMHNKVQNLKPQALTRKKDTRNAV
ALDSENNNIQVKDIVKVIDGPQSGRSGEIKHLYRSYAFLMSRMVTENGGYFVCRTRHLVL
AGGSRQSNTSFGAGSFVPMSPRLASPAHPSGGGGGGGAGGGGRGRGGISKRDRDLIGQTV
RVRQGPFKGYIGIVKDATESTARVELHASCKTISVDRGRLATLTGQKVGGFTSSHQKTPV
YGGQTPMYGGSRTPMYGSQTPLHDGSRTPHYGSQTPSHEPGSRTPGSSAWDPSSANTPSR
PNEFDFNFDESPSPADYATTPNPGTPGYQADTPSPMGPYTPQTPGSAYSPYHQASPSPAS
YQAPSPGYVGTPSPAGYQASPSPGGYAGTPSPMGYSPMTPGAPFTPQTPGTAMDHSMADW
HTQDIMVKIKETHDDPNLIFQTGEIRSVTGGMCSVYITDEDKVVNVSCEHLEPVQPEKQD
KAKVILGDERELTGTLLSIDGVEGVIKTDGGEIKMLPIKYLCKMPAS
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatagcgaggacagtgacatctctgatgctgagagtgagggtggtcagctggac
cagagtcgaggaagtgatgcgggtagcgatgcggggagtgagcctgggagccctgcaggg
agtgagggaggtgggagtgatggagggggcagcggcagtgatgaagggagtgacaaagag
gaagaagaggaagaagatgatgtagagtatgatgaggatgaagatgaacgccagagaagg
aagaaacgtgcccgagtcagcaaattcattattgaggaggctgatgttgatgatgagggt
gatgaagaggatgatgttgagtgggaggaaggtgctgaggacatcattgacaaaaagacg
atgctggatggaaatagtgcccgcgaaatggaaaatcaccagaggctgcggcaccttttt
gacagccagcgggaagacgagatcgaggagtactacagacagaagtatggggagactcct
gcagcggagaggtacggcgagggagaggagatgtcggacgagatcacacaacagggactg
ctgcctggagtcaaggatcccaacctgtgggtcgtcaaatgccggatgggtgaggagaaa
gccactgtcattcatctcatgaggaagttcattgcctatcagttcactgatgagccgctg
caaatcaagtcagtgattgccaaggagggtttgaagggttacatctacatagaagcttac
aagcagacccacgtcaagcaagctatcgagggagttggcaatctcaggatcggtctgtgg
caacagcagatggttcccattaaagagatgacggatgtcatgaaggtggtgaaggaaact
accaaccttaagtccaagtcttgggtcagactcaagagaggtgtcttcaaggatgatctt
gctcaggtggactatgtggaaccgtcgcagaacgtggttcacttgaagctgataccacgc
attgactactctaagccacgtggcgttttccgtacttcggccagtcaggaggccgagaag
aacaagaaacggaagcgtcgaccagctcagaagttgtttgatattgatggcgtcagggct
attggtggagacgtctcgactgatggagacttcctcatcttcgaggggaacagatacaac
aggaaagggttcctcttcaagagctttgtcatgtccgccattattcctgatggagtgaag
ccaacactgtccgagctggagaggtttgataacacgcccgaaggtcttgatgttgatttg
gtaccccagaagaagtcgtcgacgaccgaggtcacacacaatctggctcctggggatgtg
gtggaggtgtgcgagggggagttgctgcacctgcagggacgtgtgatccgtgtggaggga
aacaagatcaccatcatgccgaaacacgaagatttgaaggacccgctggagttccctgct
catgaactgcagaagtacttcaagatgggggatcacgtgaaggtgatcagaggacggttc
gaaggggacacagggcttatagtcagggtagaggacaacatggtggtcctcttctctgat
ctgaccatgcatgagctgaaagtgttgccaaaagatctacagctgtgtacagatatggct
actggagttgactcgatgggacagtaccagttcggggacctggtcatgatagatgcccag
acagtgggagtcatagtgaggttggagaaggagaacttccaggtcctcagcatgcacaac
aaggtacagaacttaaagccccaagccttgaccaggaagaaggacacacggaatgcagtt
gccctggactcggaaaacaataacattcaggtcaaggacattgtcaaggtcatcgatgga
ccacagtcaggtcggtctggcgagatcaaacatctgtaccgcagctacgcattcctcatg
tcaagaatggtgacagaaaatggtggctattttgtgtgtcgaactcgccatcttgtgctc
gctgggggatcaaggcaaagcaacactagttttggtgctggatcatttgtgccaatgtct
ccccgtttggccagtcctgctcaccccagtggtgggggtgggggagggggtgctggaggt
gggggtagaggtcgtggtggcattagtaagagagaccgtgaccttattggacagacggta
cgagtgagacagggacctttcaagggttatattggtattgtgaaggatgccacagaatca
acagccagagtggagcttcacgccagttgcaagactatctcagtagacaggggcagactt
gccacactcacagggcagaaggtcggaggtttcacatccagccaccagaagactcctgta
tatggtggtcagacacccatgtacggtggatccagaactcccatgtacggctcccagaca
cccctacacgacgggagcaggacgccgcactatggaagtcagacaccatctcacgagcct
ggcagtcgcactcctggatcttcagcctgggacccctccagtgccaacacgccatccaga
ccaaatgaatttgacttcaactttgatgagtccccctccccggccgactatgctacgact
ccaaaccctggcacgcccgggtaccaggcagacacgcccagtcccatggggccctacacc
cctcagactccgggcagtgcttactccccctaccaccaggcttccccatcacccgccagc
taccaagctcctagtccggggtatgtagggacccctagtcctgctggctaccaggctagc
ccctccccgggcgggtatgcagggacaccctctccgatgggctacagccctatgacacca
ggtgctccattcacaccacagacaccaggcacagcgatggaccacagtatggctgactgg
cacacgcaggacatcatggtgaagatcaaggagacccacgatgaccccaacctcatcttt
cagaccggggagatcaggagtgtcactggaggaatgtgttctgtgtacatcacggatgaa
gacaaggtggtcaacgtctcttgtgagcatctggaacctgtgcagcctgaaaaacaggac
aaggccaaggttattctgggagatgagagagagctgactggcacccttctcagtattgac
ggagtcgaaggcgtgatcaaaactgacggcggcgagatcaagatgctgcccatcaaatac
ctgtgcaagatgccagcatcatga
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