Haliotis asinina (tropical abalone): 137261639
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Entry
137261639 CDS
T10448
Name
(RefSeq) general transcription factor IIH subunit 1-like
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi03022
Basal transcription factors
hasi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
137261639
09124 Replication and repair
03420 Nucleotide excision repair
137261639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hasi03021
]
137261639
03400 DNA repair and recombination proteins [BR:
hasi03400
]
137261639
Transcription machinery [BR:
hasi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
137261639
DNA repair and recombination proteins [BR:
hasi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
137261639
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Motif
Other DBs
NCBI-GeneID:
137261639
NCBI-ProteinID:
XP_067655518
LinkDB
All DBs
Position
14:complement(35635916..35656483)
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AA seq
559 aa
AA seq
DB search
MSRSSEEVLLIVNHVRQKKTDGTLYLMGTRLAWMPGGKNSFTISHMYANIKTQKISPDTK
DKVQLQLVMHDGGANTFHFNNAEGRAAQMRDRDSVKELLQQLLPKFRMKISSELEEKNRM
LQEDPELFQLYKDLVVSQVISAEEFWASRAHKFANSTSKPEAKQVVGISPAFLADIKPQT
DGCNGLKYNLNADIIESIFRTYPMVKRKHAEYVPHRMTESEFWTRFFQSHYFHRDRTHTG
TKDLFSECAKNDDEDMKEEISRNVSDPLIDLSRIRDTAIEEGYRGMVEDSRKSNNVTNLS
MIRRFNHHSTMVLRACEVSTSNSSLDESSKTSNGESSLHNGSSAEVATPSTSKGPSGEPA
SKKRKIQEKLEYSDLQNDMRWNHVNLRLGKMERYLHGPTPVVAAKYTTSENVMQALRAVG
EEIQHWNPKLTQVLQGGQAMSILSELSPGGALMKGTSQQQLHQMIPRDVQDEIRQQYSAL
CELLRHFWTCFPPSSKFVEEKIGKMRTTLEKFQVAKLNPLKDKLASHHYSVDLCGHMEEM
LQAAYNKFDAWQAKKLSRR
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggtcatcagaggaggtgctgctcatagtcaaccatgtacgacaaaagaaaact
gatggaacgctgtatctcatgggcactcgcttggcatggatgccagggggcaagaactcc
ttcaccatcagtcacatgtatgcaaacattaaaacacagaaaatttccccagacaccaaa
gacaaggtgcagcttcagctggtgatgcacgatggtggtgcaaacacattccacttcaac
aacgcggagggacgggctgcacaaatgcgggatcgggacagcgtcaaggagctgctgcag
caactgctaccgaagtttagaatgaaaataagcagtgaactagaggaaaaaaacagaatg
ctacaggaagatcccgagttgtttcagctgtacaaggaccttgtagtcagtcaggtgatc
tctgccgaggagttctgggcctcacgtgctcataaatttgcaaactccacaagcaaacca
gaagctaagcaagttgtggggatttctccagcgttcttggcagatatcaaacctcaaaca
gatggctgcaacggtctgaagtacaacctcaatgctgatatcatagagtcgatcttcagg
acatatcctatggtaaagaggaaacatgccgagtacgtgccccacaggatgacggagagc
gagttctggaccaggtttttccagtcccactacttccaccgagatcgcacacacacaggc
actaaggatctgttttctgaatgtgccaagaacgatgatgaagatatgaaggaggagatc
agtcgcaatgtgtccgacccactgattgatctgtctcggattagagacacggccatagag
gagggttatcgtggaatggttgaagacagccggaagagcaataatgtcaccaacttgtca
atgattcgccgtttcaatcatcactccacgatggttttgcgggcatgtgaagtcagtaca
agcaacagctctctagatgaatcgtccaagacaagtaatggggagagcagtcttcacaat
ggcagttctgcggaggtagccacaccgtcaaccagtaaaggtccttctggggaaccagct
agcaagaagagaaaaattcaggagaaacttgagtactctgatctacagaatgatatgagg
tggaaccatgtgaacctgagactagggaagatggagcggtacctacacggccccactcca
gttgtggctgccaagtataccactagtgagaatgtgatgcaggcgttacgtgctgtaggc
gaggagatacagcactggaaccccaagctcactcaggtactccaaggaggccaggctatg
agcatactcagtgaactgtcaccagggggagctctcatgaagggaaccagtcaacaacag
ttacatcagatgattccccgcgatgtccaggatgaaataagacagcaatacagtgcactg
tgtgaactcttgcgacacttctggacatgttttcctccatcgtcaaagtttgtggaagag
aagataggaaaaatgaggacaactttagaaaagttccaggtggcaaagcttaaccctctg
aaggacaaactggcatcacaccattactctgtggatctgtgcggacacatggaggagatg
ctccaggctgcctacaacaagtttgatgcatggcaggctaagaagctgagccgcagatga
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