KEGG   Haliotis asinina (tropical abalone): 137265362
Entry
137265362         CDS       T10448                                 
Name
(RefSeq) THO complex subunit 3-like
  KO
K12880  THO complex subunit 3
Organism
hasi  Haliotis asinina (tropical abalone)
Pathway
hasi03013  Nucleocytoplasmic transport
hasi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hasi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    137265362
  09122 Translation
   03013 Nucleocytoplasmic transport
    137265362
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hasi03019]
    137265362
   03041 Spliceosome [BR:hasi03041]
    137265362
Messenger RNA biogenesis [BR:hasi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     137265362
Spliceosome [BR:hasi03041]
 Complex C
  Other components
   EJC/TREX
    137265362
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    137265362
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_EML_2 Beta-prop_WDR3_1st WD40_WDHD1_1st ANAPC4_WD40 WDR55 Beta-prop_Aladin Beta-prop_WDR19_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_IFT140_1st Beta-prop_TEP1_2nd Beta-prop_Vps41 WD40_MABP1-WDR62_2nd eIF2A Beta-prop_WDR36-Utp21_1st Tricorn_2nd Beta-prop_EML Beta-prop_NOL10_N Beta-prop_TEP1_C CFAP251_N RMC1_N Beta-prop_WDR35_TULP_N DSE1_N PAC11 NBCH_WD40 WD40_MABP1-WDR62_1st Beta-prop_HPS5 Beta-prop_WDR75_1st WD40_RFWD3 WDR90_beta-prop_4th TRM82_WD Beta-prop_EIPR1 Beta-prop_DCAF12 Beta-prop_NUP159_NUP214 Beta-prop_SPT8 PD40 B-prop_COPA_B_2nd Beta-prop_ELP1_1st Beta-prop_WDR75_2nd Beta-prop_WDR41 ASA1 MIOS_WD40 KNTC1_N Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 137265362
NCBI-ProteinID: XP_067656853
LinkDB
Position
15:complement(31690656..31706047)
AA seq 317 aa
MASQMESMLKHFQNNNRIRDVQAHSAKVHSVAWSCDGRKLASGSFDKTVSTYTLDRDRLS
KDHIFRGHGDSVDQLCWHPRNPDLLVTASGDKTVRIWDTRSSKSAATINTKGENINICWS
PDGSTIAVGNKEDLVTFIDAKTHRSRADEQFKFEVNEISWNNDGDLFFLTSGQGSIHILS
YPDLKLQHVLNAHPANCICIEFDPTGTYFATGSADALVSLWDAVEFVCVRTFYRLDWPVR
TLSFSCDGKMLASASEDLVIDIAYVETAEKLAEIPCETPTFTVAWHPKRHLLAFACDDKH
ERDRDSGLVKVFGFPDS
NT seq 954 nt   +upstreamnt  +downstreamnt
atggcgtcgcaaatggagagcatgctgaaacattttcaaaacaacaacaggatacgcgat
gtacaagctcattcagccaaagttcattccgtggcttggagctgtgacggccggaagtta
gcatctgggtcttttgacaaaacagtcagcacatatactctggatcgcgatagattgagt
aaggatcatattttccgtggccatggtgacagtgtggatcaactatgttggcatccacgc
aatccagacctccttgtgacagctagcggggacaagacggtccgcatctgggacacacgt
tctagcaagtcagcagctacaattaatacaaagggtgagaacatcaacatttgttggtct
ccagatggaagcaccattgctgtaggcaacaaggaagatctggtcacattcattgatgca
aagactcatagatcaagagctgatgaacaattcaaatttgaagtaaatgaaatatcttgg
aacaacgatggtgatctcttttttctgacaagtggtcaaggcagcatacacatcctcagt
tatccagacttgaagctacagcatgtcttgaatgcacatcctgccaactgtatttgtatc
gagtttgatccgactggcacttactttgccactggaagtgcagatgctctagtcagtctg
tgggatgcagtagagtttgtgtgtgtccgaacgttctacagactggactggccagtaagg
acgctgagcttcagctgtgatgggaaaatgctggcttcagcctcggaagatctggtgatt
gacatagcatatgtggaaacagctgagaaacttgcagaaatcccatgtgaaacaccaaca
tttacagttgcctggcacccaaaacgacatcttctggcatttgcatgtgatgacaaacat
gaacgtgatcgagactctggtttggttaaagtatttggcttccctgattcttga

DBGET integrated database retrieval system