Haliotis asinina (tropical abalone): 137266166
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Entry
137266166 CDS
T10448
Name
(RefSeq) uncharacterized protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137266166
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hasi03019
]
137266166
03400 DNA repair and recombination proteins [BR:
hasi03400
]
137266166
Enzymes [BR:
hasi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
137266166
Messenger RNA biogenesis [BR:
hasi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
137266166
DNA repair and recombination proteins [BR:
hasi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
137266166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
TssR_VWA
AAA_14
Motif
Other DBs
NCBI-GeneID:
137266166
NCBI-ProteinID:
XP_067657755
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All DBs
Position
15:1362805..1365333
Genome browser
AA seq
408 aa
AA seq
DB search
MSNPGMVIAVCPLNSLMQDQVLSLCDRGIKACFLNSQGTAGKTYKMISRQTDVEKQEEEE
ENDEDEDEVTENDIHAPTYVNMKERRQGEVNIIYAHPETLLNNKTVGSLLRSPLFQEKVC
AVVIDEVHVISEWGPTFRKAFKKLSEVICIFADAAHLALTATATPQAVKELAADLQFVDF
KTIRINPDRVNIFLEIQTRLPNIRKHEKLDNLIQPLAEDLSNRLAEFPLTVVYINNDEAL
GYCYQYVARHLKEKAYIPTESHIPENRIFAQYHKAYTDEMKTHIVCDLRKENPKIRLVLA
TVALGMGLNAPSIRRVIHFQPPTTLEKYLQEIGRAGRDGKKSSALLYYNKNDIAKNREDM
TEAMIKYCTNRTTCLRLQLVSYFGFDSVIFSDNPADCCINCRTAQKGM
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaatccagggatggtcatcgctgtgtgtccactcaattccttgatgcaggaccag
gttctgtcattgtgtgaccgtgggatcaaagcctgttttcttaattcacaaggtactgct
ggaaagacttacaagatgatctcacgccagactgatgtggagaagcaagaagaagaggag
gagaatgatgaagatgaagacgaagtaactgaaaatgacattcatgcgccaacttatgtc
aacatgaaagaacggcggcagggagaagtcaacatcatctatgcccatccggagactctt
ctcaacaacaagacagttggaagtctgctcagatctccacttttccaagaaaaagtctgc
gccgttgttattgatgaagtgcacgtgatatctgaatggggtccaacatttagaaaagca
ttcaagaaattatcagaggttatctgcatttttgctgatgccgctcatctggcactgact
gcaactgctacccctcaagccgttaaagaacttgctgcagaccttcagtttgttgacttt
aagacgatcagaataaaccctgatcgtgtcaacatctttctagagattcaaactcgtctg
ccaaatatcaggaaacacgaaaaattagacaacctaattcaaccacttgctgaagacctt
agtaatcgtctggctgaattccctctgacagttgtttacatcaacaatgatgaggcactg
ggatactgctatcagtatgtagcaagacatctaaaggaaaaggcatacattcctacagaa
tcacacattccagaaaaccgaatttttgcccagtaccacaaggcatacacagatgaaatg
aaaacccatattgtgtgtgacctgaggaaagaaaaccccaaaattaggttggtccttgcc
actgttgccttaggcatgggtctgaatgcacctagcatacgacgtgtaatccattttcaa
ccccctacaacccttgagaaatatctccaggaaataggtcgagcaggacgagatggcaaa
aagtctagtgccctactgtattacaacaagaatgacattgcaaagaatcgtgaggatatg
acagaggcaatgatcaagtactgtacaaacaggaccacttgcttaaggctgcagcttgtt
tcatattttggttttgattcagtcatcttttctgataacccagctgattgttgcattaac
tgcaggacagctcagaaaggaatgtga
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