Haliotis asinina (tropical abalone): 137268287
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Entry
137268287 CDS
T10448
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137268287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hasi03019
]
137268287
03012 Translation factors [BR:
hasi03012
]
137268287
Enzymes [BR:
hasi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
137268287
Messenger RNA biogenesis [BR:
hasi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
137268287
Translation factors [BR:
hasi03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
137268287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
ATPase
nSTAND3
AAA_22
NPHP3_N
AAA_19
Myosin_head
TsaE
PhoH
NB-ARC
ABC_tran
Motif
Other DBs
NCBI-GeneID:
137268287
NCBI-ProteinID:
XP_067658933
LinkDB
All DBs
Position
16:complement(9579818..9610960)
Genome browser
AA seq
1094 aa
AA seq
DB search
MIRRLLIAVDASKLSSLLSTADMYGRGRGHKGDSWGGRSGRGGRGYGGRRHDDDGDRHGR
RDRGHSRHGGRDWRDDNVDGANDGDSHSAGGGRGGRPPPGLRGRDIGMWYARRSKEKKEK
QDREQRPTVAMDSHREHHIRDLLDKINSSEPRVDMFDSPHIRPASQSNSLDNKNWTASSP
QDMFDNPYGETSSRAQPELKGACAFPDTTDFRDDKDEEELEEEVPSMSAIIEYAKAEDEF
PLAEGSVDFEGAKYAEDPMDEKDHLSDRMLEEYNEKQLQDDYCKMMQFRKKLPSYEMREK
LMDDIRNNQVVVISGETGCGKTTQVPQFILDDCIEMGIGSQCRVICTQPRRISAISVAER
VAAERCERCGGSDSSVGYQIRLEYRLPRKNGSILYCTTGIVLKFLESDPLLQRATHIVLD
EIHERDLQSDFLMIILKDILPRRPDLKVILMSATLNAAMFSKYFNDCPQLNIPGYTYPVE
EYLLEDVVEMLKYQPDSSQPQRRRPRGKRSREADEERWNFEVWCRNLEGSYSHSTITALQ
NMDFDKIDLDLIATLIRHISLNKSEGAILVFVPGWEEISKLHKMMQADRMYSSDKFRIIP
LHSLMPTVNQREVFNKPPPGVRKVVIATNIAETSITIDDIVYVIDCGKIKVKDFQPENNL
STLEAKWVSKANSKQRRGRAGRVQPGVCYHLYTGLKWTEVDDYLPPEILRTRLEELCLHI
KLLKLGKIEPFISKAIQQPSMEALHRAIITLQNLNALDKDENLLPLGYHLARMPVDPHTG
KMILFGAMFCCLDPILTVAASLSFKDAFFIPLGKEEEADRARKALSEDSKSDHIMLIKAF
EGWERAKSRGNDRDYCWQNFLSPSTLRLLKDMKGQLAQLLLELGFIKNKNPKDLAANVNS
NNYGLVKAVLCAGLYPNVAKVAKCPRPGAPPYKMVSLYTRHEGKADVHPKSVNSRENFFE
SKWMVFYHKLKTTKVYVHDCTMVSPYPLLFFGGDIGSGKDGDQDTVSVDDWIVFKASPTT
AQLVKDLRRELDKLLEHKITHPGPTSWNEAEKEGALMRAISDLITTDEDQFQSGVLAAHS
TDSQHHRRNRHKRW
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgattagacgattgcttattgcagttgacgcctcaaaattatcgagtctgctgtcaact
gcagatatgtacggccgtgggaggggacacaaaggtgactcttggggaggacgctcgggc
cgaggtggcagaggctatggaggcaggaggcatgacgatgatggggacagacatggcagg
agagaccgaggccactcgagacatggtggtagagactggagggacgacaatgtggatggt
gccaatgatggtgatagtcacagtgctggtggaggccgtggtggtcggccccctcctggt
ctacgtgggcgagacattggaatgtggtatgccagacgcagcaaggaaaagaaggagaag
caagacagagaacagagaccaacagttgccatggattcacacagagagcaccacattcgt
gacctccttgacaaaatcaactcctctgagcctcgtgtagatatgtttgacagcccacat
ataaggccagcatcacaatccaattcacttgacaacaaaaactggacagcaagttccccc
caagacatgtttgacaacccatatggagagaccagctctcgggcacagcctgaattgaaa
ggagcatgtgcattcccagacactacagactttagagacgacaaagatgaagaagagctg
gaagaggaagtgccatccatgtcggctattatagaatatgcaaaagctgaggatgaattc
ccactggctgagggttctgtggatttcgaaggtgcaaagtatgctgaagacccgatggat
gagaaagatcatcttagtgataggatgctggaggagtacaatgagaaacagctgcaggat
gactactgcaagatgatgcagttcaggaagaagttaccctcctatgaaatgagggagaaa
ctgatggatgacatacgtaacaaccaggttgttgtgatcagtggagagactggctgtggg
aaaacaacccaggtccctcagtttatcctggacgattgtattgagatggggatcgggtct
caatgccgagtcatctgtacacagcccaggaggattagtgcaatatctgtggcggagaga
gtggcggcagagcggtgtgagagatgtggggggtcagacagcagtgtcgggtaccagata
cgtctagagtacagattaccacgaaagaatggctccattctgtactgcacaacagggatt
gtcctgaagtttcttgaatctgatccgcttcttcagagagcaacccacatcgtccttgat
gagatccatgaacgtgaccttcagtctgacttcctcatgatcattctcaaggatattcta
cctcgccgacctgacctcaaggtcatactgatgagtgctacactaaatgcagcaatgttc
tcaaaatattttaatgactgcccacagctgaacatccctggctacacgtaccctgtggaa
gaatacctgctggaggatgtcgttgaaatgttgaagtatcagccagactcaagtcagcca
cagcgtcggcgtcctaggggaaagcggagtcgagaggcagatgaagagcgatggaacttt
gaggtctggtgcagaaacctggaagggagttactcacactcgaccattacagcgttgcag
aacatggactttgataaaatcgacctggatctaattgccacccttatcaggcatatttct
ttgaataagtcggagggagcgatcctggtgtttgttcctggctgggaagagatcagcaaa
ctccataagatgatgcaagcagacaggatgtacagctcagacaagttccgtatcattcca
cttcactcactcatgccaacagtcaatcagagggaggtgttcaataaaccgccacctggt
gtcaggaaggttgtcatagcaaccaatatagcagaaacaagtataactattgatgacatc
gtgtatgtgattgactgtggcaagatcaaagtgaaagactttcaaccagagaacaacctc
agcactctggaagccaagtgggtctccaaggccaactcaaaacagaggcgtggccgagct
ggaagggttcagccgggtgtgtgttaccatctttacacaggacttaagtggacagaggtt
gatgattatcttcccccagagattctgcggactcgacttgaggaactgtgtctccatatc
aagttgttgaagttggggaagattgaaccatttatatctaaggcgatccagcagccatct
atggaggcgttacacagggcaatcattacactgcagaatttgaatgccttggacaaggat
gagaatctgcttcccctcggctatcatcttgcccgtatgccagttgaccctcacacaggg
aagatgatcctatttggtgccatgttctgctgtctggaccctatcctgactgttgctgca
agtctcagcttcaaggatgctttcttcatacctctgggcaaggaggaggaagctgaccgg
gcacggaaggcattgtctgaggattccaagagtgatcacattatgcttatcaaggcattt
gagggctgggagcgggctaagtctagaggaaatgatcgcgactactgttggcagaacttc
ctatctccaagcacattacggctgttgaaggacatgaaggggcagctggctcagctctta
ctggagctggggttcatcaaaaacaagaatccaaaagacttggctgccaatgtcaactcc
aataactatggactggtgaaagcagtgctctgtgctggactttatcccaacgtagccaaa
gtggcaaaatgcccaagaccaggggcaccaccgtacaaaatggtgtctctctatactagg
catgaaggcaaggcagatgtacacccgaaatctgtcaactccagagagaatttctttgag
tccaagtggatggtgttctatcacaagttaaagacaacaaaggtgtacgtccatgactgc
acaatggtgtcaccgtatccactgcttttctttggaggagacattggttctggaaaggat
ggagaccaggacactgtgtctgtagatgactggattgtctttaaagcttcacccaccaca
gctcagctagtcaaggaccttcgacgtgagttggacaagctactggaacacaagatcacc
cacccaggacccaccagctggaatgaggcagagaaagagggagctcttatgagggccata
tcagatctcatcactacagatgaagatcagttccagtcaggggttctggcagctcattcc
acagactctcaacatcacaggaggaacagacataaacgttggtga
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