Haliotis asinina (tropical abalone): 137273298
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Entry
137273298 CDS
T10448
Name
(RefSeq) pre-mRNA-splicing factor SYF1-like isoform X1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137273298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hasi03019
]
137273298
03041 Spliceosome [BR:
hasi03041
]
137273298
Messenger RNA biogenesis [BR:
hasi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
137273298
Spliceosome [BR:
hasi03041
]
Complex B
Other components
Prp19-related factors
137273298
Complex C
137273298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
Suf
TPR_19
TPR_2
Mad3_BUB1_I
TPR_8
TPR_CcmH_CycH
TPR_15
TPR_10
ARM_TT21_C
NRDE-2
ARM_TT21
AbiH
Motif
Other DBs
NCBI-GeneID:
137273298
NCBI-ProteinID:
XP_067661954
LinkDB
All DBs
Position
2:complement(14884961..14904080)
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AA seq
853 aa
AA seq
DB search
MPVAEDDSRNDIFFEDDDLPYEEDILRNPFSVKCWLRYLEHKKEASREVVNMIYERALKE
LPGSYKLWYNYLKLRRTQVRGRCVTDPSYEDANSAFERALVFMHKMPRIWLDYCQFLIDQ
GKITRSRRTLDRALRALPITQHNRIWPLYLKFVRMYELPETAVRVYRRHLKLQKENTEQY
IEYLKTIGWLDEAAIRLADIINDETFVSREGKSKHQLWNELCELIAKNPDKVTSLKIEPI
IRQGLKRYTDQIGVLWNSLANYYIRGRHFERARDIYEEAIQTVITVRDFTQVFDEYAKFE
KSMIAAKMEAMEEAGASDEDDLDLELRLARLESLMDRRPLLLNSVLLRQNPHNVHEWHKR
VKLFEGKPREIINTYTEAVQTVDPQLASGKPHTLWVEFAKFYENAKQIEDARVIFEKAVK
VPYKHVDDLASVYCEWSEMEIRHENNDEALKLMQKATMPPPRKVAYHDETETVQSRVHKS
LKVWSLYADLEESFGTFKSCKAVYDRIIDLRIATPQIIINYGMFLEENNYFEEAFKAYEK
GIALFKWPNVYDIWNTYLTKFIDRYGGKKLERARDLFEQCLEKCPEKFAKALYLLYARLE
EEHGLARHAMAVYERATNAVLPEEQYEMFNVYIKQAAEIYGVTHTRSIYEKAIEVLPNDE
AREMSLRFADLERKLGEIDRARAIYAHCSQICDPRVAPSFWATWKEFEIKHGNEDTVREM
LRIKRSVQAIYNTQVNFMSSQMLAAAAKGDAPAAAGGVVEPNEMQKLEEKARQLAEEAVR
DQPQQPDKKLLFVRSSTTADDIGEMVKTVNPDEINIDSDFSSDDDEEVEEVEVQTQIVPN
KVFGGLVNEEEDD
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgccggtagcagaagatgattcaaggaacgacattttctttgaagatgatgatctacca
tatgaggaagatattctgaggaacccattctctgtgaaatgttggctccgctacttagag
cacaaaaaggaggcatcccgggaggtggtcaacatgatatatgagcgggcgctcaaggag
ctgccagggagctataaactctggtataactatttaaaactgaggaggactcaagtacga
ggccggtgtgtcactgacccgtcatatgaggatgcaaatagtgcctttgaaagggctctg
gtcttcatgcacaagatgccccgaatctggttagactattgccagttcctcatcgaccag
gggaagatcacacgatcccgtcgcacgctggaccgtgcactccgggccctgcctataacc
caacacaacagaatatggcctctttacctcaagtttgtccgcatgtatgaactgcccgag
actgccgtcagagtctacagaagacatcttaagcttcagaaggagaacacagaacagtac
atagagtacttgaagacgattggctggctggatgaagctgcaataagactggcagatatt
atcaatgatgaaacatttgtttcaagggaaggaaaatcaaaacatcagttgtggaatgag
ctttgtgagctgattgccaagaacccagacaaggtgacatcactgaagattgagccaatc
atccgccagggtttgaagcgttatactgaccagatcggtgttctgtggaactcactggcc
aactactacatccgaggccgtcactttgagagggcgagagatatctacgaggaagctatt
cagacagtgatcactgtccgtgacttcacacaggtgtttgatgaatatgccaagtttgag
aagagcatgatcgcagccaagatggaagctatggaggaggctggggcttctgatgaagat
gaccttgaccttgagttacggcttgcaaggctagagagtcttatggatcgtcgcccactt
cttctcaatagcgtccttctcagacagaatccccacaatgtccatgagtggcacaaacgt
gtcaagttgtttgaagggaaaccaagagagatcatcaacacatacacagaggcagttcag
acagtcgacccacagttggcatctggcaagccacacacactgtgggtagagtttgccaag
ttctacgagaatgccaagcaaatagaggatgctagagtgatctttgagaaggctgtgaag
gtgccttacaaacatgtggatgacctcgcctctgtgtactgtgagtggtcagagatggag
atcagacatgaaaataatgatgaagctctaaaactgatgcagaaagcaacaatgccacca
ccaaggaaggttgcttatcatgatgagacagagacagtgcagtcaagagtccacaagtct
ttgaaagtgtggtccttgtacgcagacttggaggaaagctttggtactttcaagtcatgt
aaagctgtatacgatcgtatcatcgatctacggattgcaaccccacagatcataatcaac
tatggcatgttcctggaggagaataattactttgaggaggctttcaaggcctatgagaag
ggaattgctttgttcaaatggccgaatgtgtatgacatatggaatacctatctcaccaag
ttcatcgacagatacggaggcaagaaattagagagggcaagggacctgtttgagcagtgt
ctggaaaaatgtcctgagaagtttgccaaagcactgtatttgttgtacgcacgtctggaa
gaggaacatggactggcacgccacgccatggctgtgtatgagagagccactaatgctgta
ctgccagaggaacaatatgaaatgttcaatgtgtacatcaagcaggctgctgagatctat
ggtgtcacacacacaaggtccatctatgagaaggccatcgaggtgctgcccaatgatgaa
gccagagagatgagtctgaggtttgctgacttggagagaaagttgggagagattgaccga
gcacgagctatctacgctcactgttcacagatctgtgacccaagagtagcaccatcattt
tgggcaacatggaaggagttcgagatcaaacatggcaatgaggacactgttagagaaatg
ctgaggatcaaacgcagcgttcaggcaatctacaacacacaggtgaacttcatgtcatcc
cagatgctggctgctgcagccaagggagatgccccagcagcagcaggtggagttgtagag
cctaacgagatgcagaaacttgaagagaaggcacggcagctggcagaggaggcggtgcga
gaccagcctcagcagcctgacaagaaactactgtttgtcaggagctcgaccacagccgac
gatattggcgagatggtgaagaccgtcaaccccgacgagatcaacatcgattctgacttc
tctagtgatgatgatgaggaagtggaggaggttgaagttcagacacagatagtccccaat
aaggtattcgggggacttgtcaatgaggaggaggatgactga
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