Haliotis asinina (tropical abalone): 137273324
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Entry
137273324 CDS
T10448
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16-like
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137273324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hasi03041
]
137273324
Enzymes [BR:
hasi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
137273324
Spliceosome [BR:
hasi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
137273324
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
WHD_HA2
Helicase_C
HA2_C
DEAD
AAA_22
AAA_19
AAA_30
PWI
nSTAND3
T2SSE
Flavi_DEAD
Cas3-like_C_2
TsaE
SRP54
Motif
Other DBs
NCBI-GeneID:
137273324
NCBI-ProteinID:
XP_067662012
LinkDB
All DBs
Position
2:complement(17345673..17376707)
Genome browser
AA seq
1031 aa
AA seq
DB search
MASIETWVNDKLHDLLGISDKYIGQYFVGLAAKSESHAEFVEKLRETGAVDVDEQVTQFA
KELFNRVPHKKKIERALTTDQHRQKELEHKNKTYTLLSEDDEDVVPAATMPKRSSKEKKR
NIRKKQESSESSSESDRNDADDLDADEDMDSDSDPDEAQRQLDLKERDEFAKRLKDRDKE
KTRTVTSKTDKKAYEEAKKRLQLETEDRKRIIPELRKQSRREYLKKRGHDKLEDLEAEIL
DDEYLFEGKNLTRREQAELNYKKKVLKLAKDHRKAGDVEKVNRYYMPKDDVKPQDRYVED
VTERGPNYEQSRWEEDHLSTALLKFGAKDAKSKKKVQEYEVIMDDEIEFVQALQLPGSIK
DKDQMPQMSEGEKQKMTIEETKKSLPIYPFKQDLIDAIHAHQVLIIEGETGSGKTTQIPQ
YLNDAGFNKNGMIVGCTQPRRVAAMSVASRVAQEMGYKLGNEVGYSIRFEDCTSERTILK
YMTDGMLLREFLSEPDLASYSVLIIDEAHERTLHTDVLFGLVKDIARFRPDLKLLISSAT
LDAQKFSEFFDDAPIFRIPGRRFPVHIFYTKAPEADYLDAVVVSVLQIHVTQAPGDILVF
LTGQEEIETAQEMLTERTRKLGSKIKELVILPIYSNLPSEMQAKIFEPTPPGGRKVVLAT
NIAETSLTIDGIIYVIDPGFCKMKSYNARTGMESLVVSPISRASANQRAGRAGRVAAGKC
FRLYTAWAYKNELEDNTVPEIQRTNLGNVVLLLKSLGINDLINFDFMDPPPHETLVLALE
QLYALGALNHMGELTKLGRRMAEFPVDPMMSKMILASEKYKCSKEVITIAAMLSVNNAIF
YRPKDKIVHADTARVNFFVPGGDHLTLLNVYTQWEDTDYSTQWCYENFIQHRSMKRARDV
REQLEGLLDRVEIEIMSNPGETVNIRKAITAGYFYHTSRMDKGGQYKTVKHHQTVMIHPN
SSLFEELPRWLIYHELVFTSKEFMRQVIEIENSWLLEVAPHYYRAKDLESGASKKMPKKA
GKARDDLNRAY
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggcttctatagaaacgtgggtaaatgacaagctccacgatctactaggcatatccgac
aaatatatcggccagtatttcgttggacttgcagcaaagtcagaaagtcatgccgaattc
gtcgaaaaacttcgcgaaacgggagcagtggatgttgacgagcaagtgacacaatttgca
aaagaattatttaatcgggttcctcataagaagaaaattgagagagccttaacaacagat
caacatcgccaaaaagaactagaacacaagaacaagacatatactttgttgtctgaagat
gacgaagatgttgtgcctgctgcaacaatgccaaagagaagttcaaaggagaaaaaaaga
aacattcgcaaaaagcaagaatcatctgagagcagtagcgagagtgacaggaatgatgcc
gatgacctggatgcagacgaggacatggactccgactcagacccagacgaggctcagcgg
cagctggacctgaaggagcgagatgagtttgccaagagactgaaggacagagacaaagag
aaaacacgaactgtaacatcaaaaaccgacaagaaggcatacgaggaagccaagaagcgt
ctacagctggagacagaagacaggaagcgcatcatcccagagttgcggaaacagtcacgt
cgtgagtacctcaagaagagaggtcatgacaaactggaggacctggaggctgagatcctt
gatgatgagtatctgtttgaaggcaaaaatctcaccaggagggaacaagctgaactgaac
tacaagaagaaggttctaaaactggccaaggaccatcgtaaggctggggatgttgagaag
gtgaaccgctactacatgccgaaagacgatgtgaagccacaggaccggtatgtggaggat
gtaacggagcgtggacccaactatgaacagtctcgatgggaggaggaccatctctccact
gctctccttaagtttggagccaaagatgcaaagtccaagaagaaggttcaggaatatgag
gtcatcatggacgatgagattgagtttgtgcaagctctccagctgccgggctcaatcaag
gacaaggaccaaatgccccaaatgtccgagggagagaaacagaaaatgaccatcgaggag
acaaagaagagcctgccaatctatcccttcaagcaggatctgattgatgctatccacgct
caccaggtcctcatcatcgagggcgagacagggtcaggcaagactacacagataccacag
tacctcaatgatgcgggtttcaacaaaaatggcatgatagttggatgcacccagcctcgc
cgagtggcggccatgtctgtagcatccagagtggcacaagagatggggtacaaactcgga
aacgaggttggctacagcatcaggtttgaggactgcacgtcggagaggaccatcctcaag
tacatgacagatggcatgctgctgcgagagttcctgtcagaaccagatctggccagttac
agtgtgttgataattgatgaggcccacgagcggacccttcacacagatgtactcttcggt
ttggtgaaggatatcgcaaggtttcgaccagatctcaaacttctgatttctagtgctaca
ctagatgctcagaagttctcagagttttttgatgatgctccaatattcaggattccaggc
agaaggtttcctgtgcatattttctacacaaaggctcctgaggcagactacctagatgct
gtggtggtgtccgtgctgcagatccatgtcacacaagcccctggggacatccttgtcttc
ctcacagggcaggaggagatcgagacagcacaggaaatgttgacggaaagaacaaggaag
ctgggctcaaagatcaaggagttagtgattcttccgatatactccaatctaccctctgag
atgcaggcaaagatatttgaacccacaccaccagggggcaggaaggttgtcctggcaaca
aatatcgcagagacgtccctgacaatagacggaatcatctatgtgatagaccctggtttc
tgtaaaatgaagagttacaacgcccggacaggcatggagtctctagttgtcagtcctata
tccagggcatcagccaatcagagggctggtcgggcagggcgtgttgctgcagggaagtgt
ttccggttgtacacagcgtgggcgtacaagaacgaactggaggacaatactgtccctgag
atccagcgcaccaacctcggcaatgtggtgctgttgttaaagagtctggggattaacgac
ctcatcaattttgacttcatggacccgccaccccatgagacgctggtgctagctttagaa
cagctgtatgcccttggggcacttaaccacatgggggagctcaccaagcttgggagacgc
atggccgagttccctgttgatccgatgatgtccaagatgatacttgcttccgaaaaatac
aagtgctccaaggaagtgatcacaattgctgccatgttgtctgtgaacaatgcaatattc
taccgtcccaaagacaaaatagtccatgcagacacagcgcgtgtcaatttctttgtccct
ggaggagaccatctgaccttattgaatgtgtacacccaatgggaggacactgactactcc
acacagtggtgttatgagaacttcatacagcaccggtccatgaagcgagcacgtgatgtc
cgtgaacagcttgaggggctcctagacagagtagaaatagaaattatgtccaaccctgga
gagactgtcaatattcgaaaggccattacagcaggctacttctaccacacatccaggatg
gacaagggcggacaatacaagacagtcaaacaccatcagacagtcatgatccacccaaac
agctcattgtttgaggagctgccacgatggcttatctaccacgaactggtgttcacctca
aaagagttcatgagacaggtgatcgagatagagaatagttggcttctggaagtagcgcca
cattactaccgggccaaggacctcgagtcaggtgccagtaagaagatgcccaaaaaagca
ggaaaagccagggatgacttgaacagagcgtattga
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