Haliotis asinina (tropical abalone): 137273354
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Entry
137273354 CDS
T10448
Name
(RefSeq) nucleoporin NUP188-like
KO
K14311
nuclear pore complex protein Nup188
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137273354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hasi03019
]
137273354
Messenger RNA biogenesis [BR:
hasi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
137273354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup188_N-subdom_III
Nup188_N
Motif
Other DBs
NCBI-GeneID:
137273354
NCBI-ProteinID:
XP_067662066
LinkDB
All DBs
Position
2:complement(18283161..18331763)
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AA seq
1782 aa
AA seq
DB search
MAGGVESFNNRALWQFISGAGVQRPKELIAIELKKNKAKILDGLTYYRKQTTPTGEQLKK
ERKVSEARLEFTQKLSRFLGLDEVQSYDLLMSFLANDFRGSKKNLQQVFGHERHAQALIM
KIRDYYFTERLYLLKCLHQVLNFWPDTQHPYKEAYSQFLNDLLDNYQLTEKLLSQFSDVS
KAQMPTWESHGPLMTEHQSQAWIHQNLKEQCELLELLLLYFKDFETNEKGFLDLLEKFKG
HGFGYLQSYKHALGKADEKIVKRIGYLEMLILLDLMDFTTAAKCREDNNFDEHLLLSKRD
TFNKVNKIFEHLGSERQVAPLLLGWAVLRQLYIDDDEGTMMTRKLGNMALQLGVFDYTLD
LLKMEPFNGSTIIASFARLIVYSLMYVTLSLFDEDTLGNPEALYEVAALVLKADFNAEYM
WQKGLEEGLGCLYSSALACFPLDFPKLMKLNTSLSSCGPESAKRVKLSMQELKLYTEYFD
TNSSQDIIPTQQSSVFRLARPKLPYIAGDLVIPRGTLGQLSGINAQAAKRSSPIIQWELV
YNGWQLLMCEVQELLHQIAQGGGMVSPLQISRVTQVMQLVRQVMTSDPDSVEEFSEIVNL
GFQVIQRFSAVSPPPLDLLANTVECITCSVKHNVKQIWHNMKQTGLLPFLTENVDNLGEV
LSGRGLSSGLYGTIVASTETTQGRYPLTLAVLGFLTELIEPLSKEGREEELQPVMMYVLR
EIFPVYHKWRYYDITRRETIGHKCLQVFHKILNLMTLQKKKSKSERPRLQEVCVYSLLFT
EAGRALLDILATGVDSVEQAVASQGSNVEGVGVDLIQLIQLSFSVLNRLLLLRSPDLPMS
PTEHALSSQPAGHQHQHIVATIAQYIYHRHDPRLPTLAAVLLKRLALVSPMSILACLGND
AEPIRDMFLTRLQALSEDLRLKVMILELLSECVETQPGLIEVFLNVQMVDSSDGKKQDLS
LGKSSCLQTVLSLMDIKKQSSYQCPPDLLCACADFIHSLWRGLRETAMEVLRTKDAFWPS
VFAPLTRNLPDPTSDMNDHSLKYEIKTVAFVFKILAQELYIIHSSKLDDKLKKSLQMISK
DKRLNTWTEFLRRCLVAEGENAEVGGDEEMKENATLQLLLAWKNFLITSSKFKVDDLTLP
DKVKEKIIMDLLAGIQAQFNGSLTALNMKLASVASALLFTLIKHWTSCISKPSAMMVTLR
EAVGETCANSETLIPSVQIGLLGCLTVLLQHSRQENSVALDTDKLTDLLPNICSVLIQSS
RQLPAPWEMRDPGSCQTKTGEMRDEGRTQLKEGEPRDTSSKDGETVDAKLKLQIVTCSLL
EELIEVIGDDQVWMPILQQHSILQTLLISVELFMKAKRGLPYVHAVFLLLLSVARSERGS
AALSLADLTPHTCLVATNCYTNEDIFSRPAVPLKSGSFFVPMVQSWHNVYCLCMEVYSTV
LAALRHSFLEDSLSFAGAHQDRITQSMEIARISLLDTALREAESSCDFICQLSAFSREWR
LHLPDVLDKFLTSMVYMNQTFIALLIRPRYLLHVLEQQRGQDRVSKKDSIHSSPMLQHQA
STEDLEQPTTQLVCVQLRMLSILSRSLTALKHFTPDLCEVLLDQSMDISEYDCFLGLGFS
TPSVDQETQPTFGTFISCVTTCYRILSKLDPRGTGSPHRSPEAATSQHIPKSLVLYVMEN
ALYIIMSQACHYLRTPGLSSREKQFLKRELGAELNSFLSSMLRYMRRGGGGPTSPGTLQA
SPQGGSSSTSQLSRSVSQTAFTNTQDQAFFKLVNDFVSKVLR
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atggcgggaggcgtggagagtttcaacaatcgagcattatggcagttcataagtggcgca
ggcgttcagaggccaaaggagttgattgcaatagagctgaagaaaaacaaggctaagata
ttagatggccttacctactacagaaaacaaacgacccctactggagagcagctgaagaag
gagagaaaggtgtccgaggctcgactcgagttcacacagaaactcagtcggttcctgggc
cttgatgaggttcagagctatgacctcctcatgtcattcctcgccaacgactttaggggc
tccaagaaaaacctgcagcaagtgtttggtcatgagcgccacgcccaggcgctgatcatg
aagatccgtgactactactttaccgagagactgtacctgttgaagtgtctccatcaagtc
ctcaacttctggccagacacacagcacccatacaaggaggcatacagccagttcctgaat
gacctcctggacaactaccagctcacagagaagctgctgtctcagttctctgatgtgtct
aaagctcagatgccaacttgggagtctcacggaccgctgatgacagaacatcaatctcag
gcatggatacaccagaatctgaaagaacagtgtgagctgctggaattgttgctgctttac
ttcaaggactttgagacaaatgagaaaggtttcctggatctcctggagaaattcaagggt
catgggttcggatacctgcagagctacaagcatgccctggggaaggctgatgagaagata
gtcaagagaataggctacctggaaatgctgatcctgcttgacctaatggacttcaccacg
gctgccaaatgtcgagaggacaacaattttgatgagcaccttctcctcagtaagagagat
acatttaacaaagtcaacaagatatttgagcacctggggtctgagcggcaggtagcaccg
cttttgttgggatgggccgtcctccgccagttgtacatcgacgatgatgagggcaccatg
atgacaaggaagttgggcaatatggcgctgcagttgggagtatttgactacacccttgac
ctgcttaagatggagccgtttaatggcagcacgattatcgcctcctttgccagactcatc
gtctactccctgatgtatgtcacactcagtctgtttgatgaagacacactgggcaatcct
gaggccctgtatgaagtggctgccttggtgctgaaagctgactttaatgctgaatacatg
tggcagaagggtctagaggaggggctcggctgtctctacagttctgccttggcctgcttt
cctctcgactttccgaagctgatgaagctcaacacatctttgtcatcatgtggaccagag
agtgccaagagggtgaaactgtcgatgcaggagttgaagctgtacactgagtatttcgac
accaacagctctcaggatatcatacccacacaacagagctctgtgttcagactggccagg
cctaaactcccatatattgctggggacctggtaataccaagaggaacgcttggacaactc
tctggtatcaatgctcaggcagccaaaaggagcagccccatcatccaatgggagttggtg
tacaacggctggcagctcctgatgtgtgaggtgcaggaactgctgcaccagatagctcaa
ggtggaggaatggtgtcaccgctacagatatccagagtcacccaggtcatgcagctggtg
cgccaggtcatgacctccgaccctgactctgtagaagagttcagtgagattgttaatctt
ggattccaagtcattcagagattcagtgctgtgtctcctcctcctctggacctcttagcc
aacactgtggaatgcatcacgtgcagtgttaaacacaacgtaaagcagatatggcacaac
atgaagcaaacgggattacttcccttccttacagagaatgtagataaccttggagaggtg
ttgagtgggcgtgggctcagttctgggctgtatggcaccatcgtagccagcacggagact
acacaaggcagataccccctcactcttgccgtccttggcttcctcacagagttaattgag
cctctgtcaaaggaggggagagaagaggagcttcagccagtgatgatgtacgtcctgcga
gagatctttcctgtgtatcataagtggagatattacgacatcaccaggagagagacaata
ggccacaagtgtttgcaggtgttccataagatcctcaacttaatgacattgcaaaagaag
aaatcaaaaagtgaaaggcctcgactgcaggaggtgtgtgtgtacagtctactgtttact
gaggctggtcgggctcttctggacattcttgccactggtgtagacagtgttgagcaggct
gttgcctctcagggcagcaatgtagagggtgtcggcgtcgacctcatccaactcatccaa
ctttccttctctgtcctcaaccgcctcctgttactgaggtcccctgacctccccatgtca
ccgacggagcacgctctctcctcacaaccggctgggcaccagcatcaacacatcgtggcc
accatcgcccagtacatctaccatcgtcatgaccctcgcctccctacactggcggctgtg
ctgctaaagagacttgctttggtgtctccaatgtcaatcctggcctgcctaggcaatgat
gccgagcccatccgagacatgttcctcactagactacaggctctgtctgaggatctacgg
ctgaaggttatgatcctggagctgttatcagagtgtgtggagacacagccgggactcatc
gaggtcttcctcaatgtgcagatggtggactcttcagatggcaagaagcaagacctgagt
ttagggaagagctcctgtctgcagacagtactcagcctgatggacatcaagaaacagagc
agctaccagtgtcccccagacctgctgtgtgcctgtgctgacttcatccattccttgtgg
cgtggactacgggagacggccatggaggtgctccgcaccaaggatgccttctggccgagt
gtgtttgctccactgacgcggaacctgcctgacccgacatcagacatgaatgatcattcc
ctcaagtatgaaataaaaactgtggcattcgttttcaagatcctggcacaggaactgtac
ataatccacagctccaaactggatgataagctgaagaaatccctgcagatgatctccaag
gacaaacgactcaacacgtggactgagttcttgagacgttgtctggtggcagagggggag
aacgctgaagttggtggggatgaagaaatgaaggaaaatgctactctgcagctcctgttg
gcctggaagaacttcctcatcacatcgtccaagttcaaggtggatgatctaacactgcct
gacaaggtgaaggagaagattatcatggatctactggctggaattcaggcccagtttaat
gggagcctaacagctctaaacatgaaactagcatcagtggccagtgccctgctctttaca
ctcatcaaacattggacaagctgcatcagtaagccatctgccatgatggtgacactgcgg
gaggctgttggtgagacatgtgctaacagtgagaccctcatcccctctgtacaaatcggc
cttcttggctgtctcaccgtcctgctacagcacagcagacaggaaaacagcgttgctctt
gacacggacaagttgacagacctgctgcccaatatctgctcagtactgatacagagttcc
cgccagctgccagcaccatgggagatgagggaccctggcagctgtcagaccaagactggg
gagatgagggacgaagggcgcacccagctgaaagagggggaacccagggatacaagcagc
aaagatggggagaccgttgatgcgaaacttaaacttcagattgtcacctgcagtctgctg
gaggaactgattgaggtgatcggggacgaccaggtgtggatgcccatcctgcagcaacac
tcgatcctacagaccctgctcatctctgtggagttattcatgaaggccaagcgaggattg
ccatacgtccatgctgtgttcctgctacttctgagtgtggcccggtctgaaaggggttca
gcagcactgtccctggcggacctgacgcctcacacctgccttgtagcgaccaactgctac
actaatgaggacatcttctcccggccagcggtgccccttaagtctggcagcttctttgtg
cccatggtccagtcgtggcacaacgtgtactgcctgtgtatggaggtgtactccacagtg
ctggccgcactcagacactccttcctggaggactctctcagctttgccggggcacatcag
gacaggatcacacagtcgatggagattgcccgtatcagcctgctggacacagcactcagg
gaggcagagtcatcctgtgacttcatctgtcagttgtctgcctttagtcgggagtggcgc
cttcatctgccggatgtgctagacaagttcctgacctcaatggtgtacatgaaccagacc
ttcatcgctctgcttatcagacctcgatatctgctgcatgtccttgagcaacagcgaggc
caggatagagtcagcaagaaagattccatccattcgtccccaatgttgcagcaccaggca
tccacggaggacctggaacagcccaccacacagctggtctgtgtacagctcagaatgttg
agtattttgtctcggagtctgacggcactgaaacatttcacccccgatctgtgcgaagtc
ctcctggatcagagcatggacatcagtgagtacgactgcttcctgggtctggggttcagc
acaccttctgtggatcaggagacacagcccacgttcggcaccttcatatcttgtgtgacc
acctgctataggatactcagtaagctggatccgagagggacgggctcaccacaccggtcg
ccagaagctgccacaagccagcatatacctaaaagcctcgtgctgtatgtgatggagaat
gccttgtacatcatcatgtcacaggcctgtcactacctccgcacccccggactttcgtca
cgagaaaaacagttcctcaagcgagaactcggagcagaactgaactcctttctgtcaagc
atgctaaggtacatgcggcgtgggggtggggggcccacatcgcctgggacactccaagcc
agtcctcagggtggttccagtagcacctcacagcttagtcgatctgtgtcccagacagct
ttcacaaacacacaggaccaggccttcttcaaactggtgaacgactttgttagcaaagtc
ctcagatga
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integrated database retrieval system