Haliotis asinina (tropical abalone): 137273493
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Entry
137273493 CDS
T10448
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137273493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hasi03041
]
137273493
Spliceosome [BR:
hasi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
137273493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
PRP4
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_EML
Beta-prop_EIPR1
WDR90_beta-prop_4th
WD_LRWD1
Beta-prop_WDR41
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
WD40_RFWD3
Ge1_WD40
CaM_binding
Motif
Other DBs
NCBI-GeneID:
137273493
NCBI-ProteinID:
XP_067662307
LinkDB
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Position
2:26683788..26703506
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AA seq
516 aa
AA seq
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MSDDEVDLPVPKRSKVLHYGSLEDQERRRLNNDDTSGSMANDAIEAGIEAGNINITEGGH
FDIDEAEAESQAEVLAQFEKRKRARQIQVSTDDSEVKANLRQLGEPICLFGEGPAERRER
LRQLLARLGEDAVKKKKEEKLQEQRKKEEENITWYHEGTESLKDARYWLADYSIPRAKER
VSKERESKLTPMAQKNAQIQELQKRIRSVTNDCSQIGDDRPLSHCQFSPDSQMLAVASWS
GLCKLWSIPDCQLIRQLRGHNCHVGAIVFHPDATIGLDNSVCCMASCGQDGSVKLWNLVS
DEPIADIEGHAPFRVSKLAYHPSGRFLGTCCFDNSWRLWDLQAQEEILHQEGHSKPVYSI
AFQNDGALAVTGGLDAYGRVWDLRTGRCVMFMEGHLKSILTVDFSPDGFHVASGSEDNTA
KVWDLRHRKCNYTIPAHTNLISTVRFQPEHGNYLLTASYDNTAKIWASPNWAPLKTMAGH
EGKVMGLDVSLNLKYIATCSYDRTFKLWVSEMQGGL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgacgaagtagatcttccggtgccaaagaggtcgaaagtgttgcattatggg
agtttggaagaccaggaaagacgtcgcctcaataatgatgacacttcaggttcaatggct
aatgatgctatcgaggcaggcattgaagctggaaatatcaacatcactgaaggaggacac
tttgacatagacgaggcagaagccgagagtcaggcagaggtgctagcacagtttgaaaag
aggaaacgggctcgtcagattcaggtgtcgacagatgactcggaggtgaaggccaacctg
cgacagttgggagaaccgatatgtttattcggtgagggtccagcagagaggcgagagaga
ttgcgccagttattggcccgacttggagaagatgctgtgaagaagaagaaggaggagaag
ttgcaggaacagaggaagaaggaagaggagaatatcacatggtatcatgaaggaacagag
agcttgaaggatgcacgatactggttggctgactactccattccaagagcgaaggagagg
gttagcaaagaacgagaaagtaaactgactcccatggcacagaagaatgctcagatacag
gagctacagaagagaataaggtctgtaacaaatgactgcagtcagattggagatgaccga
cctctgtcccactgtcagttcagcccagactcccagatgcttgcagtcgcctcatggtct
gggttgtgtaaactatggtccattccagactgccaattgatccgacagttgcgaggccac
aattgccatgttggtgctattgtgttccaccccgatgctacaatcggtctagacaacagt
gtatgctgtatggcatcatgtggacaggatggttccgtcaagctctggaatctagtcagt
gatgaacctattgcagatattgaaggtcatgcaccattccgtgtgtccaaactggcctat
cacccttcagggcgatttcttgggacatgctgtttcgacaactcgtggcggctgtgggac
ttgcaagcccaggaggagatcctgcatcaggagggacacagtaaaccagtgtactccatc
gccttccagaatgatggagcgcttgccgtcacaggagggctggatgcgtatggcagagtg
tgggacctgcgaacaggccgctgcgtgatgttcatggagggacacctcaaatccatcctc
accgtcgacttcagtcctgatgggttccatgtggcttctggaagtgaggacaacacagcc
aaagtgtgggacctgcggcaccgcaagtgtaactacaccattcccgcccacaccaacctc
atctccactgtcaggttccagcctgaacatgggaactacctccttacagcttcctatgac
aacactgccaagatatgggccagccccaactgggcccctctgaagacaatggctggtcat
gagggcaaggtgatggggctcgatgtctccctcaacctcaaatatatcgcaacttgttcc
tatgatcggacattcaagctgtgggtgtcggagatgcagggtggtttgtga
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