KEGG   Haliotis asinina (tropical abalone): 137273853
Entry
137273853         CDS       T10448                                 
Name
(RefSeq) DNA repair protein RAD50-like
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
hasi  Haliotis asinina (tropical abalone)
Pathway
hasi03440  Homologous recombination
hasi03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:hasi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    137273853
   03450 Non-homologous end-joining
    137273853
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hasi03032]
    137273853
   03400 DNA repair and recombination proteins [BR:hasi03400]
    137273853
DNA replication proteins [BR:hasi03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    137273853
DNA repair and recombination proteins [BR:hasi03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     137273853
    BRCA1-C complex
     137273853
   NHEJ (non-homologous end-joining)
    MRX complex
     137273853
SSDB
Motif
Pfam: AAA_23 Rad50_zn_hook AAA_15 AAA_21 SbcC_Walker_B SMC_N AAA_13 ABC_tran AAA_29 AAA_16
Other DBs
NCBI-GeneID: 137273853
NCBI-ProteinID: XP_067662833
LinkDB
Position
2:49159541..49197232
AA seq 1312 aa
MSTIEKMSIQGVRSFGPDDSNKQVITFFKPLTLILGPNGTGKTTVIECLKYMTTGDMPPG
SKGGAFIHDPKVAHEREVKGQIRLLMRDMTGQQCSVQRSITATQKVKKIETRTLDGVITR
WGPDGQKKSITSRCAELDREMVTALGVSKAVLDNVIFCHQEESNWPLSEGKPLKEKFDAI
FASTRYTKVLETIRKLKQEQDGHIKLYKQDLKYLKEHKDKATQLQSDLEELNSKSAASKE
SVAKITEQLVPIEERLDQIQQNANEIFKVKTKIEKLESEKGQLEKNIQELHDNIEHEFQG
PIEELKRVMEDFEDKLQEKKDTVQQMERRREELTMSAEKLGREKSHLQLEVGKLQQEAQT
HKVNVKKRDELIRNLAAQYEFEGFEGEQISDEKYKSFFENVRSKVELMVANTRELKTKYE
EKEASLQKKMDDLRDNKTKLEQSERIKKDLMTKNSNEIRQINQKLSHMEASAGRLDQLSR
DLKGAELDLSSTEGTVNLEDLKREITVLDKDRRQLDTTLSDLNAEMNRLNRELETQTQLD
MLKKERTSKEDIIRRLKAKHEDGLTYLLGHMPTTNIRGQLEDFIGQQTEQVRQCSAELQK
ARTDLSSKEAEKNMQGRQIKDTENKLTGLEERIFDVCGSQDFDDGLNSVQTKMAQAQDKR
GSLLGAEHFFKKYQEDLEKDNPCCPLCHREFATDQEVRELILELQDKLRLVPTHLRKAEK
DLNEFQQKYDNMTQLKPLRENIVTLRDTEIPQLKNKHRRLNEEIQKVRDLVQNKEDELQA
KETDEVTGKSMQPDIVMMDRYYGEIRELDKKIATQSSMLSGGDSGRTLETVIGEKEDKQM
QLDTINRKLDHKRQKLSDHSEHVQKLRSKVNTLKEEKLKIDSELQQQTKLEETKASLVTD
NKLHEQDIQDAKTQIRPLEEQIERQRQEKMKLIATKDDKIDGAKAEIDCVKAEAKQVKDV
NGEIKLYNQSMKAERLEECQERMSNITTKETSLNQEREEISENVNKLSKDLATQQIRERE
LMDNLQLRQKQKEVGRLEREIGVLQDQMGDFDTANLERERRKLLQKADEMQKERNICKGR
QEGLDNMIRNTKKELQSDMFKDAGSRYRDMMIQMRTTELANSDLEKYYRAMDKAIMNYHV
QKMEEINKIIRELWRNTYRGNDIETIEIRSDDEDGAALKSRRSYHYRVVMIKGDTALDMR
GRCSAGQKVLASLIIRLALAETFCVNCGILALDEPTTNLDRENIESLAYALVSIIKARSC
QKNFQLVVITHDEDFVELLGRSDYVDDFYQMSKDQSGCSCITKSKVQNLHRG
NT seq 3939 nt   +upstreamnt  +downstreamnt
atgtccaccatagagaaaatgagtattcaaggggtgcggagctttggtccagatgattcc
aacaagcaagtcatcacattcttcaagcccctgacactcattctcggaccaaatggtaca
gggaaaacaactgtaatcgaatgtctaaagtatatgacaacaggtgacatgccccctggc
agcaagggaggagcgttcatccatgaccccaaggttgcccatgagcgtgaagtgaagggt
cagattcgtctcctgatgagagacatgacgggtcaacagtgtagcgtacagagatccata
acagctacacagaaggtgaaaaagatagagacacgaacactggatggtgtgattactaga
tggggacctgatggacaaaagaagagcatcacatccaggtgtgctgaactagacagggag
atggtgactgcacttggtgtgtccaaggctgtgctggacaatgtcatcttctgtcaccag
gaggaatccaactggccactgagtgagggtaagcccctgaaggagaagtttgatgccatc
tttgcctcgaccagatacaccaaggtgctggagaccattcggaaactcaaacaagagcag
gacggacacatcaagctgtacaagcaggacctgaagtacctgaaggaacacaaggacaag
gcaacacagctgcagtcagacctggaggaactcaatagcaagtctgcagcatccaaggag
tctgtggccaagataactgagcagcttgttcccatagaggagcgtcttgatcaaatacaa
cagaatgcaaatgagatcttcaaagtgaagactaaaattgagaaactggagagtgagaaa
ggtcaactggagaaaaatattcaagaacttcatgacaatattgaacatgagtttcaggga
cccatagaggaactgaagcgagtcatggaggactttgaggacaagctccaggagaagaag
gatacagtgcagcagatggagcgacggagggaggaattgacaatgtcggcagagaaactt
ggcagggagaagtcacatctgcagctggaagtgggcaagttgcagcaggaggctcagact
cacaaagtgaacgttaagaaacgggatgaactgatacgtaacctggctgcccagtatgag
tttgaaggatttgagggagagcaaatctctgatgagaagtataagtcgttctttgaaaat
gtcagaagcaaagtggagctaatggttgccaacactagagagttgaagactaagtatgaa
gagaaggaggcttcccttcagaagaagatggatgacctgcgggacaacaagaccaagctg
gagcagagtgagcggatcaagaaagacctcatgaccaagaactcgaatgagatccgacag
attaaccagaagttgagccacatggaggcatcagctggtagacttgaccagctgagcagg
gacttgaagggagcggagctggacttgagcagcacagaagggacagtcaacctggaggat
ctgaagagggagataactgtccttgacaaggatagacggcagctggacacaactctcagt
gatctgaacgcggagatgaatcgtctgaaccgtgaactggagacccagactcagcttgac
atgttgaagaaggagaggacttccaaggaggacatcatccgccgactgaaggctaaacac
gaggacggcctgacatacctattgggacacatgccaacaaccaacatccggggacaactt
gaggactttatcggacagcagacggagcaagtgaggcagtgttctgcagagctgcagaaa
gccaggactgatctctcctccaaggaggctgaaaagaacatgcaggggaggcagatcaag
gatactgaaaataagctaacaggacttgaagagaggatatttgatgtgtgcggcagccag
gactttgacgatggactcaattctgtgcagaccaagatggctcaggcacaggataaacgt
ggttcacttcttggtgcagaacatttcttcaagaagtatcaggaagatctggaaaaagac
aatccttgttgtcctctgtgtcaccgagaatttgccactgatcaagaagtccgggaactg
atccttgagctgcaagacaagctccgtctcgtaccaacacacctgaggaaggcagagaaa
gaccttaatgaattccagcagaagtatgacaacatgacgcaactcaagcctctccgggaa
aatatcgtgaccctgagggatacagagattccacaactcaaaaacaaacatcgtcgcctg
aacgaggagatccagaaagttagagatctggtgcagaataaagaggatgagctgcaggct
aaggagacggacgaggtgaccgggaagagtatgcagcctgacattgtcatgatggatcgc
tactatggagagatccgagaactggacaaaaagattgccacacaaagctccatgttgtct
ggaggggactctggacggaccttggagactgtgattggggagaaagaagacaagcagatg
cagctagatactatcaatcgcaagctggaccacaaacgacaaaagctcagtgaccactct
gagcatgtgcagaagctgaggtcaaaggtgaacacactgaaggaagaaaagctgaagatc
gacagcgagctgcaacaacagaccaagttggaggagactaaagccagcctcgtcaccgac
aacaaacttcatgaacaggacattcaggacgccaagacacagatcaggccactcgaggag
cagattgagcgccagcgccaggagaaaatgaagctgatagcgaccaaggatgacaaaatt
gacggagccaaggctgagattgactgtgtgaaggcggaggccaaacaagtgaaggatgtc
aatggtgaaattaagctgtacaaccagtctatgaaggccgaaagactggaagagtgtcag
gaacggatgtcgaacatcacaaccaaggagacaagtcttaaccaggaacgggaggagatc
tcagagaatgtcaacaagcttagcaaggatctggccactcagcagatccgagagcgggag
cttatggacaacctccagctacgacagaagcagaaggaggtgggtcgtctggagcgtgag
atcggcgtcctgcaagaccagatgggagactttgacaccgccaacctggagagagagagg
aggaagttgctgcagaaggcagatgagatgcagaaagagcgcaacatctgcaaaggtcgc
caggagggtctggacaacatgatccgcaatacgaagaaggagttgcagtccgacatgttc
aaggatgctggatccaggtatcgggacatgatgatccagatgaggacaaccgagttagcc
aatagtgacctggagaagtactacagagcaatggacaaggccatcatgaactaccatgtc
cagaagatggaggagatcaacaagattatccgggaactgtggagaaacacatatcgagga
aatgatattgaaacaattgagattcgttctgatgacgaggatggcgctgccctgaaatcc
cggcgcagctaccactaccgtgtggtgatgatcaagggggacacagctctggatatgaga
ggtagatgcagtgccggacagaaggtgttggcatccctgatcatccgactggcattggct
gaaacattttgtgtcaactgtggaatactggccctggatgaacctactacaaacctggac
agggagaacatagagagtctggcttatgctctcgtctcgattatcaaggctcggtcatgc
cagaaaaacttccagctggtggtgatcacccatgacgaggactttgttgaactccttggg
aggtcagattatgtggatgacttctatcagatgagcaaggaccagtcaggatgttcctgc
atcaccaagtctaaagtgcagaatctacatcgaggttaa

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