Haliotis asinina (tropical abalone): 137273853
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Entry
137273853 CDS
T10448
Name
(RefSeq) DNA repair protein RAD50-like
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi03440
Homologous recombination
hasi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
137273853
03450 Non-homologous end-joining
137273853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hasi03032
]
137273853
03400 DNA repair and recombination proteins [BR:
hasi03400
]
137273853
DNA replication proteins [BR:
hasi03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
137273853
DNA repair and recombination proteins [BR:
hasi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
137273853
BRCA1-C complex
137273853
NHEJ (non-homologous end-joining)
MRX complex
137273853
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_15
AAA_21
SbcC_Walker_B
SMC_N
AAA_13
ABC_tran
AAA_29
AAA_16
Motif
Other DBs
NCBI-GeneID:
137273853
NCBI-ProteinID:
XP_067662833
LinkDB
All DBs
Position
2:49159541..49197232
Genome browser
AA seq
1312 aa
AA seq
DB search
MSTIEKMSIQGVRSFGPDDSNKQVITFFKPLTLILGPNGTGKTTVIECLKYMTTGDMPPG
SKGGAFIHDPKVAHEREVKGQIRLLMRDMTGQQCSVQRSITATQKVKKIETRTLDGVITR
WGPDGQKKSITSRCAELDREMVTALGVSKAVLDNVIFCHQEESNWPLSEGKPLKEKFDAI
FASTRYTKVLETIRKLKQEQDGHIKLYKQDLKYLKEHKDKATQLQSDLEELNSKSAASKE
SVAKITEQLVPIEERLDQIQQNANEIFKVKTKIEKLESEKGQLEKNIQELHDNIEHEFQG
PIEELKRVMEDFEDKLQEKKDTVQQMERRREELTMSAEKLGREKSHLQLEVGKLQQEAQT
HKVNVKKRDELIRNLAAQYEFEGFEGEQISDEKYKSFFENVRSKVELMVANTRELKTKYE
EKEASLQKKMDDLRDNKTKLEQSERIKKDLMTKNSNEIRQINQKLSHMEASAGRLDQLSR
DLKGAELDLSSTEGTVNLEDLKREITVLDKDRRQLDTTLSDLNAEMNRLNRELETQTQLD
MLKKERTSKEDIIRRLKAKHEDGLTYLLGHMPTTNIRGQLEDFIGQQTEQVRQCSAELQK
ARTDLSSKEAEKNMQGRQIKDTENKLTGLEERIFDVCGSQDFDDGLNSVQTKMAQAQDKR
GSLLGAEHFFKKYQEDLEKDNPCCPLCHREFATDQEVRELILELQDKLRLVPTHLRKAEK
DLNEFQQKYDNMTQLKPLRENIVTLRDTEIPQLKNKHRRLNEEIQKVRDLVQNKEDELQA
KETDEVTGKSMQPDIVMMDRYYGEIRELDKKIATQSSMLSGGDSGRTLETVIGEKEDKQM
QLDTINRKLDHKRQKLSDHSEHVQKLRSKVNTLKEEKLKIDSELQQQTKLEETKASLVTD
NKLHEQDIQDAKTQIRPLEEQIERQRQEKMKLIATKDDKIDGAKAEIDCVKAEAKQVKDV
NGEIKLYNQSMKAERLEECQERMSNITTKETSLNQEREEISENVNKLSKDLATQQIRERE
LMDNLQLRQKQKEVGRLEREIGVLQDQMGDFDTANLERERRKLLQKADEMQKERNICKGR
QEGLDNMIRNTKKELQSDMFKDAGSRYRDMMIQMRTTELANSDLEKYYRAMDKAIMNYHV
QKMEEINKIIRELWRNTYRGNDIETIEIRSDDEDGAALKSRRSYHYRVVMIKGDTALDMR
GRCSAGQKVLASLIIRLALAETFCVNCGILALDEPTTNLDRENIESLAYALVSIIKARSC
QKNFQLVVITHDEDFVELLGRSDYVDDFYQMSKDQSGCSCITKSKVQNLHRG
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccatagagaaaatgagtattcaaggggtgcggagctttggtccagatgattcc
aacaagcaagtcatcacattcttcaagcccctgacactcattctcggaccaaatggtaca
gggaaaacaactgtaatcgaatgtctaaagtatatgacaacaggtgacatgccccctggc
agcaagggaggagcgttcatccatgaccccaaggttgcccatgagcgtgaagtgaagggt
cagattcgtctcctgatgagagacatgacgggtcaacagtgtagcgtacagagatccata
acagctacacagaaggtgaaaaagatagagacacgaacactggatggtgtgattactaga
tggggacctgatggacaaaagaagagcatcacatccaggtgtgctgaactagacagggag
atggtgactgcacttggtgtgtccaaggctgtgctggacaatgtcatcttctgtcaccag
gaggaatccaactggccactgagtgagggtaagcccctgaaggagaagtttgatgccatc
tttgcctcgaccagatacaccaaggtgctggagaccattcggaaactcaaacaagagcag
gacggacacatcaagctgtacaagcaggacctgaagtacctgaaggaacacaaggacaag
gcaacacagctgcagtcagacctggaggaactcaatagcaagtctgcagcatccaaggag
tctgtggccaagataactgagcagcttgttcccatagaggagcgtcttgatcaaatacaa
cagaatgcaaatgagatcttcaaagtgaagactaaaattgagaaactggagagtgagaaa
ggtcaactggagaaaaatattcaagaacttcatgacaatattgaacatgagtttcaggga
cccatagaggaactgaagcgagtcatggaggactttgaggacaagctccaggagaagaag
gatacagtgcagcagatggagcgacggagggaggaattgacaatgtcggcagagaaactt
ggcagggagaagtcacatctgcagctggaagtgggcaagttgcagcaggaggctcagact
cacaaagtgaacgttaagaaacgggatgaactgatacgtaacctggctgcccagtatgag
tttgaaggatttgagggagagcaaatctctgatgagaagtataagtcgttctttgaaaat
gtcagaagcaaagtggagctaatggttgccaacactagagagttgaagactaagtatgaa
gagaaggaggcttcccttcagaagaagatggatgacctgcgggacaacaagaccaagctg
gagcagagtgagcggatcaagaaagacctcatgaccaagaactcgaatgagatccgacag
attaaccagaagttgagccacatggaggcatcagctggtagacttgaccagctgagcagg
gacttgaagggagcggagctggacttgagcagcacagaagggacagtcaacctggaggat
ctgaagagggagataactgtccttgacaaggatagacggcagctggacacaactctcagt
gatctgaacgcggagatgaatcgtctgaaccgtgaactggagacccagactcagcttgac
atgttgaagaaggagaggacttccaaggaggacatcatccgccgactgaaggctaaacac
gaggacggcctgacatacctattgggacacatgccaacaaccaacatccggggacaactt
gaggactttatcggacagcagacggagcaagtgaggcagtgttctgcagagctgcagaaa
gccaggactgatctctcctccaaggaggctgaaaagaacatgcaggggaggcagatcaag
gatactgaaaataagctaacaggacttgaagagaggatatttgatgtgtgcggcagccag
gactttgacgatggactcaattctgtgcagaccaagatggctcaggcacaggataaacgt
ggttcacttcttggtgcagaacatttcttcaagaagtatcaggaagatctggaaaaagac
aatccttgttgtcctctgtgtcaccgagaatttgccactgatcaagaagtccgggaactg
atccttgagctgcaagacaagctccgtctcgtaccaacacacctgaggaaggcagagaaa
gaccttaatgaattccagcagaagtatgacaacatgacgcaactcaagcctctccgggaa
aatatcgtgaccctgagggatacagagattccacaactcaaaaacaaacatcgtcgcctg
aacgaggagatccagaaagttagagatctggtgcagaataaagaggatgagctgcaggct
aaggagacggacgaggtgaccgggaagagtatgcagcctgacattgtcatgatggatcgc
tactatggagagatccgagaactggacaaaaagattgccacacaaagctccatgttgtct
ggaggggactctggacggaccttggagactgtgattggggagaaagaagacaagcagatg
cagctagatactatcaatcgcaagctggaccacaaacgacaaaagctcagtgaccactct
gagcatgtgcagaagctgaggtcaaaggtgaacacactgaaggaagaaaagctgaagatc
gacagcgagctgcaacaacagaccaagttggaggagactaaagccagcctcgtcaccgac
aacaaacttcatgaacaggacattcaggacgccaagacacagatcaggccactcgaggag
cagattgagcgccagcgccaggagaaaatgaagctgatagcgaccaaggatgacaaaatt
gacggagccaaggctgagattgactgtgtgaaggcggaggccaaacaagtgaaggatgtc
aatggtgaaattaagctgtacaaccagtctatgaaggccgaaagactggaagagtgtcag
gaacggatgtcgaacatcacaaccaaggagacaagtcttaaccaggaacgggaggagatc
tcagagaatgtcaacaagcttagcaaggatctggccactcagcagatccgagagcgggag
cttatggacaacctccagctacgacagaagcagaaggaggtgggtcgtctggagcgtgag
atcggcgtcctgcaagaccagatgggagactttgacaccgccaacctggagagagagagg
aggaagttgctgcagaaggcagatgagatgcagaaagagcgcaacatctgcaaaggtcgc
caggagggtctggacaacatgatccgcaatacgaagaaggagttgcagtccgacatgttc
aaggatgctggatccaggtatcgggacatgatgatccagatgaggacaaccgagttagcc
aatagtgacctggagaagtactacagagcaatggacaaggccatcatgaactaccatgtc
cagaagatggaggagatcaacaagattatccgggaactgtggagaaacacatatcgagga
aatgatattgaaacaattgagattcgttctgatgacgaggatggcgctgccctgaaatcc
cggcgcagctaccactaccgtgtggtgatgatcaagggggacacagctctggatatgaga
ggtagatgcagtgccggacagaaggtgttggcatccctgatcatccgactggcattggct
gaaacattttgtgtcaactgtggaatactggccctggatgaacctactacaaacctggac
agggagaacatagagagtctggcttatgctctcgtctcgattatcaaggctcggtcatgc
cagaaaaacttccagctggtggtgatcacccatgacgaggactttgttgaactccttggg
aggtcagattatgtggatgacttctatcagatgagcaaggaccagtcaggatgttcctgc
atcaccaagtctaaagtgcagaatctacatcgaggttaa
DBGET
integrated database retrieval system