Haliotis asinina (tropical abalone): 137274467
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Entry
137274467 CDS
T10448
Name
(RefSeq) THO complex subunit 2-like
KO
K12879
THO complex subunit 2
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi03013
Nucleocytoplasmic transport
hasi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137274467
09122 Translation
03013 Nucleocytoplasmic transport
137274467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hasi03019
]
137274467
03041 Spliceosome [BR:
hasi03041
]
137274467
Messenger RNA biogenesis [BR:
hasi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
137274467
Spliceosome [BR:
hasi03041
]
Complex C
Other components
EJC/TREX
137274467
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
137274467
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
TPR_19
Motif
Other DBs
NCBI-GeneID:
137274467
NCBI-ProteinID:
XP_067663765
LinkDB
All DBs
Position
2:complement(84615194..84672092)
Genome browser
AA seq
1517 aa
AA seq
DB search
MASICISADACKAWEKTGKSEFVKQCRKLQSESNGLWEPGEKSMKRAMYELCWSVLRGHL
KQDQALAALGDLNDHMRNVYSLLADTIAVVDVETTCNEDKAQRDRFITFVRASAGLITEP
VLKERLDQETLEAVGLIFSKLQFQQKYVKTKTKLYYKQQKFNLLREESEGYSKLVTELNQ
EIPSNVTYHQVLENIKSLIGCFDLDPNRVLDIMLEAFECRPEQESFYIPLFKDYVTDKLT
LCHILGFRFHEQNQEIDSTASLFRVAALLLRHNLVHLEDLYPHLLPSDSDIIAFHEKELA
DAKAYQRKLNIVSLSDRKDEDKDKDDMVNIDLRTNNQKIGLCEALLAIGAWDNAKAVLDR
MPEFFAMSNTSTAQALCQLIHSLVEPLYQQNSGLSRVLMKKRDRRWKGKISPDAVTTFLQ
LHQRVMPMFLYLGPHASRDPILMAKFIRLGRTFMTKRHEGGVGPEDDVAYHGFLNILDDV
ILPSMCLLPCNCCLTEELWGLLKLYKYELRYRLYGHWKNDSHQHHAILIRRRADCLERAK
YIMKRLSKETVKPSGRQIGKLSHSNPGVVFEYVLSQIQRYDNFIGPVVDSLKFLTSFSYD
VLAFCIIEAVASPEKERMKHDDTNISLWLQSLANFAGCICRKYQVELAGIMQYVANKLKA
GKSIDLLLLREVVQKMTGVEISEEMTNDQLEAMTGGELLRQEGGYFAQVRNTKKSSTRLK
ETLLEHDLALSLCLLMSQQRNCVVFKEGSNRHLKLVGKLYDQCQDTLVQFGSFLSMQLST
EEFVKRLPSIDVLMTTFHLPADSAFFLSRSLYAHGINAKYEEKRKSDKGQKSSSQTKIQR
YIEASEEVLKPTIDLVHSLYPSKVWEDISPQFYLTFWSLSMYDLAAPTTAYEKQIQQLNS
QISAIDDNRDMPQSKKKKEKERCNNLMEKLKEEEKKQNEHVNRVMARLQHERDHWFLSRE
GSKSEAITEVLQLCIFPRCCFTASDAIFCAKFIHVLHELKTPHFSTLICYDRIFCDITYT
VTSCTENEASRYGRFLCSALDTIMKWHSDSAIFEKECFGYPGFVTVFRKATKDKENSNKA
DGLDFENYRHVCHKWHFRLTKAMVACLESQNYIQIRNALIILTKILPHYPRIMQFGQALE
RRVDRLSKDEKDKRPDIYALAMGYSGQLKSKKQQWMPEVRFHIKDVEAKKAAQAAAAAAN
GSGIRADAAKDTKKRESNGGVKDGKENKDIKQGKESGDKGDKPEKKDKSEKKEKKDGKSK
SDKKSPDEGKDTSSSKSSSKEKEIVKEKSHKDKSGERTKDKSMTKEERAEAKAARENGKS
EKKKGEKKSKEEKGSKVKREKDDSDRPEKDESRSSVSKEPGERVDERIISSGSSLRHSTD
NSPRYGDERDSKRRKIDVSSSGSKEAVHEGKSKHMRSPSYEREKEIYREKEKKERKRDHS
LDMDNETKRRRSEDNTKTSKLNGEPDRRRSRSREHSWERSSPSMSRRGNRDVFDSDESPA
KSKVKVKKEKTSSSKKK
NT seq
4554 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatctgtatttcggcggatgcttgcaaagcttgggaaaagacgggcaaatca
gaatttgtaaagcaatgccgaaagctacagagcgagagcaatggtttatgggagccaggg
gagaagagtatgaagcgagcaatgtacgagctctgctggagtgttcttcggggccatctc
aaacaagaccaagccctggctgctctaggagatctaaatgatcacatgaggaatgtctat
tcacttctggcagatacaatagctgtggttgatgtggagaccacttgcaatgaggacaag
gcacagagagatcgatttataacatttgtccgagccagcgctggtttgatcactgagcct
gtactaaaggaacgtttagatcaggaaactctggaagcagttggccttattttttccaag
ttgcaattccaacagaaatatgtcaagaccaagacaaagctatattataagcagcaaaag
ttcaacttactccgggaggaaagtgagggctactcaaaactggtgacagaactcaatcaa
gaaataccctcaaatgtcacatatcatcaagtgctagaaaacataaagtctctcataggc
tgttttgacttggaccctaatcgggtgttggacatcatgcttgaggcctttgagtgccgc
ccagaacaggagtcattctacattccacttttcaaagattatgtcactgacaaactgacg
ctttgtcatattctgggatttagatttcacgagcaaaatcaagaaattgattccacagcc
tcactattccgggttgcagcactgctgttgagacacaacttggtacatctagaagatctc
tatccacatctcctgccatcagactcagatattattgcattccatgaaaaagaattggct
gatgctaaagcctaccagcgtaaactaaacattgtgtcattgtctgaccgtaaagatgaa
gacaaagataaggatgacatggtcaatatagacctgcgtaccaataaccagaagattggc
ctgtgtgaagctttgctggctattggagcctgggacaatgcgaaagctgttctcgatcga
atgccagagttctttgcaatgtcaaacacatctactgcccaagccttgtgtcagctgatt
cactcacttgtggaacctctttatcagcagaacagtggtttatcaagagttctgatgaaa
aagcgagaccgaagatggaagggtaagatatcccctgatgctgtcacaacatttctacag
ttacaccagagagtcatgccaatgtttctctacctgggaccacatgcttcacgtgatcca
atactcatggcaaagttcatccgacttggcaggaccttcatgaccaagcgtcatgaaggt
ggagtgggtcccgaagacgatgttgcttaccatgggttcctgaacatcttggatgatgtc
atcctgccaagcatgtgtctcctaccctgtaactgctgtctcactgaggagctatgggga
cttctgaaactctacaagtatgaactcagataccgtttgtatggtcactggaagaatgac
tcccatcagcatcatgcaatcctgatccgaaggagggcggattgtctggagcgggccaag
tacatcatgaagcgcttgtccaaagaaacagtcaagccatctggtcgacaaattggaaaa
cttagtcacagcaacccaggagtagtgtttgaatatgttctgtcacaaatccagcgctat
gataacttcattggcccagttgtggactcactcaagttcctcacgtccttctcctatgat
gtcttagcattctgtataatagaagctgtggcaagtcctgaaaaggagagaatgaagcat
gatgatacaaacatctccttgtggctccagagtctggcaaactttgctgggtgcatctgt
cgcaagtaccaggtggaactggctgggatcatgcagtatgtggccaataaactcaaggca
ggcaagagtattgacctgctgctgttgagggaggtggtacagaagatgacaggtgtagaa
atatctgaggagatgaccaatgaccagttggaagccatgacggggggcgagctgctcaga
caggagggaggctactttgcccaggtgcgcaacaccaagaagtcatcaactcgcctgaaa
gagacgcttttggaacacgaccttgctctgtcactatgtctgctcatgtcacagcagagg
aactgtgttgtctttaaggagggatccaacaggcatctcaaactcgtggggaaactctat
gatcagtgtcaggacacactggttcagtttggcagcttcctgtccatgcagctgagtaca
gaggaatttgtgaagagactgcccagtatagatgtcctcatgaccacgtttcatctgccc
gctgactcagccttcttcctgtccaggtctctctatgcacatgggatcaatgccaagtat
gaagagaagagaaagagtgataagggccagaaaagtagtagccagacaaagattcagcgc
tatattgaagcatctgaagaagtcttgaaaccaaccattgacctggtccattctctatat
ccaagcaaagtgtgggaagacatcagccctcagttctacttgactttctggtctctgtca
atgtatgacctagcagccccgactacagcatatgagaaacagatccagcagctcaacagc
cagatcagtgctattgatgataacagggacatgccccagagcaagaagaagaaggaaaag
gaacgatgtaacaacctgatggagaagctgaaggaggaagagaagaagcaaaatgaacat
gtcaaccgagtgatggctcgactccagcatgaacgtgatcactggttcctatcacgtgag
ggttccaagagtgaggcaatcacagaggtcctccagttatgcatcttccctcgatgttgc
ttcacggccagtgatgcaatcttctgtgccaagttcatacatgtacttcatgagctgaag
acacctcacttctcaactctaatctgctatgatagaatcttctgtgatattacctatact
gtgaccagctgtacagaaaacgaagctagtcggtatggccgtttcctctgttctgcactc
gacaccatcatgaaatggcatagtgacagtgccatcttcgaaaaggaatgttttgggtac
cctgggtttgtgacggtattcaggaaggcaaccaaggataaagagaacagcaacaaggca
gatgggttggactttgagaactacagacatgtgtgccacaaatggcatttcagactgaca
aaggcaatggtagcatgtctggaatcccaaaactacatccagatcagaaatgctctcatc
atcctgacaaagattctacctcactacccccgcatcatgcagtttggccaggcgttggag
cggcgagtagatcgcctcagtaaagatgagaaggacaagagaccagacatatatgctctg
gccatgggatactctggtcagctgaagagcaagaagcaacaatggatgccagaggttcga
ttccatatcaaagatgttgaagctaaaaaggctgcccaagcagcagcagcagcagccaat
ggctcagggatcagagcagatgctgctaaggatacgaagaaacgagaatcaaatggtggt
gtgaaagatgggaaggaaaacaaggacattaaacagggtaaggagagtggtgacaaggga
gataaacctgaaaagaaagacaagtcagagaagaaggaaaagaaagatggaaaatctaag
tcagacaagaaatcaccagatgaagggaaagatacttcaagctccaagtcttcatccaag
gaaaaggagattgtgaaggagaagtctcacaaggacaaatctggggagaggaccaaggac
aagtccatgacaaaagaggaacgtgcagaggctaaggcagctcgggagaatggcaagtca
gaaaagaagaagggtgagaagaagagtaaagaggaaaaggggtcgaaggtgaaacgtgag
aaagatgacagtgatcggcctgagaaggacgaatccaggagtagcgtgagcaaggagcct
ggagagagagtagacgagcggattatcagcagtggcagttccctgaggcatagtacagac
aactctcctcgatatggcgatgaaagagattccaaacggaggaagattgatgtgtcatcg
tcaggttctaaggaggctgtccatgagggcaagtccaaacatatgaggagcccttcttac
gaaagagaaaaggagatctacagagaaaaagagaagaaggagaggaaaagggaccattct
ctggacatggacaatgagaccaagaggaggcgcagtgaagataatacaaaaacatccaaa
ctgaatggtgaacctgatcggcgacgcagcagaagccgggaacatagctgggagagatcc
agtccatccatgtcaaggcgtggaaatagggacgtctttgattctgacgagtccccagcc
aagtctaaagtcaaagtgaaaaaagagaaaacttcatcttccaagaagaaatga
DBGET
integrated database retrieval system